; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019500 (gene) of Snake gourd v1 genome

Gene IDTan0019500
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlight-regulated protein-like
Genome locationLG07:2556681..2561974
RNA-Seq ExpressionTan0019500
SyntenyTan0019500
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR009856 - Light regulated Lir1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066931.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa]3.8e-3768.09Show/hide
Query:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA
        A+L+I V  +LPS+   N SH    P I+ GS SSRRS IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQP        AVA 
Subjt:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA

Query:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        LEEIDREYLDYAA SKTVF GEACDDLGGEFC AEFLNGVF
Subjt:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

KAG6588864.1 Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4470.06Show/hide
Query:  MQALLTIVVSPILPS-TPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS------------------FLAEACETIGGEACWGNNIFPE
        MQA+L+IVV P+LPS TPS NLSHFPSSPSI   S SSRRSTIK   AVAYDTSVVDYSS                  F AEACETIGGEACW  NIFPE
Subjt:  MQALLTIVVSPILPS-TPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS------------------FLAEACETIGGEACWGNNIFPE

Query:  VKLQPPS---QAAVAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        V+LQ  +   +AA  ALEEIDREYL YAA SKTVFPGEACDDLGGEFCGAEFLNG+F
Subjt:  VKLQPPS---QAAVAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

XP_016900821.1 PREDICTED: light-regulated protein isoform X3 [Cucumis melo]2.5e-3667.38Show/hide
Query:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA
        A+L+I V  +LPS+   N SH    P I+ GS SSR S IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQP        AVA 
Subjt:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA

Query:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        LEEIDREYLDYAA SKTVF GEACDDLGGEFC AEFLNGVF
Subjt:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

XP_022928578.1 light-regulated protein-like [Cucurbita moschata]1.7e-4577.78Show/hide
Query:  MQALLTIVVSPILPS-TPSKNLSHFP-SSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA
        MQA+L+IVV P+LPS TPS NLSHFP SSPSI   S SSRRSTIK   AVAYDTSVVDYSS    F AEACETIGGEACW  NIFPEV+LQ  +   +AA
Subjt:  MQALLTIVVSPILPS-TPSKNLSHFP-SSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA

Query:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
          ALEEIDREYLDYAA SKTVFPGEACDDLGGEFCGAEFLNGVF
Subjt:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

XP_023531712.1 light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-4678.32Show/hide
Query:  MQALLTIVVSPILPS-TPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQ---PPSQAAV
        MQA+L+IVV P+LPS TPS NLSHFPSSPSI   S SSRRSTIK   AVAYDTSVVDYSS    F AEACETIGGEACW  NIFPEV+LQ     ++AA 
Subjt:  MQALLTIVVSPILPS-TPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQ---PPSQAAV

Query:  AALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
         ALEEIDREYLDYAA SKTVFPGEACDDLGGEFCGAEFLNGVF
Subjt:  AALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

TrEMBL top hitse value%identityAlignment
A0A0A0L8G9 Uncharacterized protein1.0e-3566.67Show/hide
Query:  MQALLTIVVSPILPST--PSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA
        MQA+L+I V  +LPS+   S   SHF   P I+  S SSRRS+IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQ  S   Q  
Subjt:  MQALLTIVVSPILPST--PSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA

Query:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        VA+ EEIDREYLDY A SKTVFPGEACDDLGGEFC  EFLNGVF
Subjt:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

A0A1S3BND3 light-regulated protein isoform X21.2e-3667.38Show/hide
Query:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA
        A+L+I V  +LPS+   N SH    P I+ GS SSR S IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQP        AVA 
Subjt:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA

Query:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        LEEIDREYLDYAA SKTVF GEACDDLGGEFC AEFLNGVF
Subjt:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

A0A1S4DXW1 light-regulated protein isoform X31.2e-3667.38Show/hide
Query:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA
        A+L+I V  +LPS+   N SH    P I+ GS SSR S IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQP        AVA 
Subjt:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA

Query:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        LEEIDREYLDYAA SKTVF GEACDDLGGEFC AEFLNGVF
Subjt:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

A0A5A7VMP8 Light-regulated protein isoform X21.8e-3768.09Show/hide
Query:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA
        A+L+I V  +LPS+   N SH    P I+ GS SSRRS IK TA+V YDTSVVDYSS    F AEACETIGGEAC   N+FPEV+LQP        AVA 
Subjt:  ALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPP----SQAAVAA

Query:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
        LEEIDREYLDYAA SKTVF GEACDDLGGEFC AEFLNGVF
Subjt:  LEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

A0A6J1EPG4 light-regulated protein-like8.3e-4677.78Show/hide
Query:  MQALLTIVVSPILPS-TPSKNLSHFP-SSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA
        MQA+L+IVV P+LPS TPS NLSHFP SSPSI   S SSRRSTIK   AVAYDTSVVDYSS    F AEACETIGGEACW  NIFPEV+LQ  +   +AA
Subjt:  MQALLTIVVSPILPS-TPSKNLSHFP-SSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPS---QAA

Query:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF
          ALEEIDREYLDYAA SKTVFPGEACDDLGGEFCGAEFLNGVF
Subjt:  VAALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGAEFLNGVF

SwissProt top hitse value%identityAlignment
Q03200 Light-regulated protein, chloroplastic1.1e-1556.18Show/hide
Query:  AAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPSQAAV--AALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGA
        AAVA + + VDYSS    F  EAC+ IGGEAC    ++PE KL   +  AV  AA EE+DR+YL Y     TVFP EACDDLGGEFC A
Subjt:  AAVAYDTSVVDYSS----FLAEACETIGGEACWGNNIFPEVKLQPPSQAAV--AALEEIDREYLDYAAHSKTVFPGEACDDLGGEFCGA

Q96500 Light-regulated protein 1, chloroplastic1.0e-1345.83Show/hide
Query:  ILP-STPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSSFLAEACETIGGEACWGNNIFPEVKLQPPSQAAVAALEEIDREYLDYAAHSK
        +LP +T +  LS   S+ S S  SL+S  +T      V Y++S++  S F AEACE I G AC   +I+PEVKL     +   A E +DREY +Y +  K
Subjt:  ILP-STPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSSFLAEACETIGGEACWGNNIFPEVKLQPPSQAAVAALEEIDREYLDYAAHSK

Query:  TVFPGEACDDLGGEFCGAEF
        TVF  EACDDLGGEFC  +F
Subjt:  TVFPGEACDDLGGEFCGAEF

Arabidopsis top hitse value%identityAlignment
AT3G26740.1 CCR-like7.5e-1545.83Show/hide
Query:  ILP-STPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSSFLAEACETIGGEACWGNNIFPEVKLQPPSQAAVAALEEIDREYLDYAAHSK
        +LP +T +  LS   S+ S S  SL+S  +T      V Y++S++  S F AEACE I G AC   +I+PEVKL     +   A E +DREY +Y +  K
Subjt:  ILP-STPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSSFLAEACETIGGEACWGNNIFPEVKLQPPSQAAVAALEEIDREYLDYAAHSK

Query:  TVFPGEACDDLGGEFCGAEF
        TVF  EACDDLGGEFC  +F
Subjt:  TVFPGEACDDLGGEFCGAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTCTTCTTACCATTGTTGTTTCTCCCATTCTTCCCTCAACACCTTCTAAGAACCTCTCTCATTTTCCCTCTTCTCCCTCGATCTCAATTGGCTCTCTCTCCTC
GCGCCGCTCGACAATCAAACCAACCGCTGCAGTCGCTTATGACACTTCAGTGGTTGATTATAGCTCTTTTCTTGCAGAAGCATGTGAGACAATCGGTGGAGAAGCGTGTT
GGGGTAATAATATATTTCCAGAAGTGAAGCTTCAGCCTCCTTCACAAGCCGCAGTTGCTGCTTTGGAAGAGATTGATAGAGAATATCTTGATTATGCAGCCCATTCAAAG
ACCGTTTTCCCAGGAGAGGCTTGTGATGATCTTGGTGGAGAATTCTGTGGAGCTGAGTTTCTAAATGGCGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTCTTCTTACCATTGTTGTTTCTCCCATTCTTCCCTCAACACCTTCTAAGAACCTCTCTCATTTTCCCTCTTCTCCCTCGATCTCAATTGGCTCTCTCTCCTC
GCGCCGCTCGACAATCAAACCAACCGCTGCAGTCGCTTATGACACTTCAGTGGTTGATTATAGCTCTTTTCTTGCAGAAGCATGTGAGACAATCGGTGGAGAAGCGTGTT
GGGGTAATAATATATTTCCAGAAGTGAAGCTTCAGCCTCCTTCACAAGCCGCAGTTGCTGCTTTGGAAGAGATTGATAGAGAATATCTTGATTATGCAGCCCATTCAAAG
ACCGTTTTCCCAGGAGAGGCTTGTGATGATCTTGGTGGAGAATTCTGTGGAGCTGAGTTTCTAAATGGCGTTTTCTAA
Protein sequenceShow/hide protein sequence
MQALLTIVVSPILPSTPSKNLSHFPSSPSISIGSLSSRRSTIKPTAAVAYDTSVVDYSSFLAEACETIGGEACWGNNIFPEVKLQPPSQAAVAALEEIDREYLDYAAHSK
TVFPGEACDDLGGEFCGAEFLNGVF