; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019563 (gene) of Snake gourd v1 genome

Gene IDTan0019563
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationLG04:31091269..31114735
RNA-Seq ExpressionTan0019563
SyntenyTan0019563
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267774.1 unnamed protein product [Prunus armeniaca]3.9e-6554.26Show/hide
Query:  RKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPEN
        +  SQ+ SS+   +K    E  +      M+  ED    +A+L+   N    + R IFV+ENA L KG V K+WKILDS  D  FLLK KK+L DFRP  
Subjt:  RKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPEN

Query:  VRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDI
        V + L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI
Subjt:  VRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDI

Query:  QNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW
          YV++ SD+ NL+FVV A  H KI+   TDD ISVS+YPL +   VG+ICE+LEHKW
Subjt:  QNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW

KAA0032138.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]8.5e-12184.39Show/hide
Query:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD
        MP +KR+NS+S SSKLAR KQ  VEN     +DE+KNVEDV    +SL D+MNEK QE RVIFVL+NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKD
Subjt:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD

Query:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE
        F PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSRIIG+SNGLE
Subjt:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE

Query:  KLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH
        KLVDIQNYVS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS VGMICEALEHKWIVEP  H
Subjt:  KLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH

TYK14383.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]1.2e-7489.44Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSR   +SNGLEKLVDIQNY
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNY

Query:  VSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH
        VS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS VGMICEALEHKWIVEP  H
Subjt:  VSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH

XP_008456875.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]2.0e-10990.41Show/hide
Query:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEK QE RVIFVL+NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSS
        RFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSRIIG+SNGLEKLVDIQNYVS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS 
Subjt:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSS

Query:  VGMICEALEHKWIVEPPSH
        VGMICEALEHKWIVEP  H
Subjt:  VGMICEALEHKWIVEPPSH

XP_038891816.1 ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]2.2e-8986.57Show/hide
Query:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD
        M  +KR+NS+SSSSKLARLKQ RVEN     +DE+KNVEDV+  N+SL DV+NEK QE RVIFVL+NAPLHKGLVGKKWKILDSWRDQ FLLKHKKNLKD
Subjt:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD

Query:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE
        F PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLL+KRCIRAEDTNEVLFRVLNEPLSQHLP NSRIIG+SNGLE
Subjt:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A1S3C5G9 ribosomal RNA small subunit methyltransferase NEP1-like9.5e-11090.41Show/hide
Query:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEK QE RVIFVL+NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSS
        RFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSRIIG+SNGLEKLVDIQNYVS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS 
Subjt:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSS

Query:  VGMICEALEHKWIVEPPSH
        VGMICEALEHKWIVEP  H
Subjt:  VGMICEALEHKWIVEPPSH

A0A5A7SNC0 Ribosomal RNA small subunit methyltransferase NEP1-like4.1e-12184.39Show/hide
Query:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD
        MP +KR+NS+S SSKLAR KQ  VEN     +DE+KNVEDV    +SL D+MNEK QE RVIFVL+NAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKD
Subjt:  MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD

Query:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE
        F PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSRIIG+SNGLE
Subjt:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLE

Query:  KLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH
        KLVDIQNYVS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS VGMICEALEHKWIVEP  H
Subjt:  KLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH

A0A5D3CR92 Ribosomal RNA small subunit methyltransferase NEP1-like5.8e-7589.44Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLL+KRCIRAEDTNEVLFR+LNEPLSQHLP+NSR   +SNGLEKLVDIQNY
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNY

Query:  VSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH
        VS   DDKN +FVVSATDHKKIN C DDMISVSHYPLVSMS VGMICEALEHKWIVEP  H
Subjt:  VSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH

A0A6J5TWQ3 Uncharacterized protein1.9e-6554.26Show/hide
Query:  RKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPEN
        +  SQ+ SS+   +K    E  +      M+  ED    +A+L+   N    + R IFV+ENA L KG V K+WKILDS  D  FLLK KK+L DFRP  
Subjt:  RKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPEN

Query:  VRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDI
        V + L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI
Subjt:  VRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDI

Query:  QNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW
          YV++ SD+ NL+FVV A  H KI+   TDD ISVS+YPL +   VG+ICE+LEHKW
Subjt:  QNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW

M5Y7H9 Uncharacterized protein (Fragment)5.4e-6560.66Show/hide
Query:  NEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRF
        N    + R IFV+ENA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RF
Subjt:  NEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRF

Query:  CGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSV
        CG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI  YV++ SD+ NL+FVV A  H KI+   TDD ISVS+YPL +   +
Subjt:  CGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSV

Query:  GMICEALEHKW
        G+ICE+LEHKW
Subjt:  GMICEALEHKW

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP18.4e-3137.25Show/hide
Query:  RVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VLE A L    VGK +++L+  R +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYPLVSMSSVGMICEAL
        L K  +RA D  + L +V+  P+S H P     IG S  +E + DI+  V ++     ++FVV A  H K++   T+ M+S+S+YPL +  +   +  A 
Subjt:  LRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYPLVSMSSVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q92979 Ribosomal RNA small subunit methyltransferase NEP12.7e-2935.29Show/hide
Query:  RVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VLE A L    VGK +++L+  + +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYPLVSMSSVGMICEAL
        L K  +RA D  + L +V+  P+S H P     +G S  +  + D++  V ++     ++FVV A  H K++   T+ M+S+S+YPL +  +   +  A 
Subjt:  LRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYPLVSMSSVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q9P8P7 Ribosomal RNA small subunit methyltransferase NEP14.8e-2634.43Show/hide
Query:  RVIFVLENAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L        G  G ++ +L+    Q  L K  +++ + RP+   Q LL + DS +NKAG++  VY++   GVL E+ P  RIPRT+ RF 
Subjt:  RVIFVLENAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTC---TDDMISVSHYPLVSMSS
        GL++ LL K  IR+E++ EVL +V+  P++ HLP   R + +S   E L  +Q+YV+   +++++   V A    K N      D+ I +S YPL +  +
Subjt:  GLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTC---TDDMISVSHYPLVSMSS

Query:  VGMICEALEHKW
            C   E  W
Subjt:  VGMICEALEHKW

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP14.8e-2633.49Show/hide
Query:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        V++  A E R+I VLE A L    V   +++L+       + K++++    RP+   Q LL +FDS +N+AG +  V+V+ +  VL EI P  RIPRT+ 
Subjt:  VMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYV-----SAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYP
        RF GL++ LL K  IRA D++  L  V+  P++ H+P   +   +S   + L + ++ V     ++AS D+ ++ V+ A  H  + T  T+++ S+S+YP
Subjt:  RFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYV-----SAASDDKNLIFVVSATDHKKINT-CTDDMISVSHYP

Query:  LVSMSSVGMICEALEHKW
        L +  +   IC A E  W
Subjt:  LVSMSSVGMICEALEHKW

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.8e-2833.03Show/hide
Query:  NASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR
        NA      N+   +  +  VLE   L    VG ++ IL S +  +FL K KK+  D+RP+ + Q LL++ DS +N+AGK+  V+ +    VL ++ P  R
Subjt:  NASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR

Query:  IPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYP
        IPRT++RFCGL++ LL K  IRA +T + L  V+  P+S HLP  SR + +S  + +L      V+  +D+  ++ +      K +    D    +S+YP
Subjt:  IPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIFVVSATDHKKINTCTDDMISVSHYP

Query:  LVSMSSVGMICEALEHKW
        L +  +   +   LE  W
Subjt:  LVSMSSVGMICEALEHKW

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related3.1e-4439.25Show/hide
Query:  EKRKNSQSSSSKLARLKQVRVE---NSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD
        E+++ ++ SS K  +    R E   +   + ++     ED+  G   + +  N+  ++  ++FVLE A L    VGK +++L+S    +FL K+ +N  D
Subjt:  EKRKNSQSSSSKLARLKQVRVE---NSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKD

Query:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQ-HLPNNSRIIGISNGL
        +RP+   Q LL I DS VNKAG++ AVYV+ + GVLFE+KPH RIPRT+ RF G++L LL+K  I A ++ E L R +  P+ + HLP NS  IG S+  
Subjt:  FRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQ-HLPNNSRIIGISNGL

Query:  EKLVDIQNYV-SAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW
        EKLV++Q ++ +   DD++ +FVV A  H KI+    D+ +SVS YPL +   +  ICEAL   W
Subjt:  EKLVDIQNYV-SAASDDKNLIFVVSATDHKKIN-TCTDDMISVSHYPLVSMSSVGMICEALEHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGTGAGAAAAGGAAGAATTCCCAGAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGTGAGGGTAGAAAATTCTGCAGCTTTGGGCATTGATGAAATGAAAAA
TGTTGAAGATGTTGATATTGGCAATGCCAGTTTGTCCGATGTGATGAATGAGAAAGCTCAAGAGCCTCGGGTAATATTTGTTCTAGAAAATGCTCCTTTGCACAAGGGTC
TTGTCGGGAAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTC
CTTGACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTGGGGGCTGTTTATGTCAAAATTGACGATGGAGTACTATTTGAAATTAAGCCACATGCTCGTATCCCAAG
AACATATAATCGCTTTTGTGGACTCATTTTGGATTTGCTACGGAAGAGATGTATTCGTGCTGAAGATACGAATGAAGTACTTTTTCGTGTACTCAACGAACCATTGTCTC
AACATTTACCCAACAACTCTCGTATTATTGGTATCTCTAATGGTTTGGAAAAGTTGGTTGACATACAGAACTATGTTTCTGCTGCTAGTGATGATAAGAATCTCATTTTT
GTGGTCAGTGCAACGGATCATAAGAAAATCAATACGTGTACGGATGACATGATATCAGTTTCACACTATCCGCTGGTCTCCATGAGTTCTGTAGGTATGATTTGTGAAGC
ATTGGAGCATAAATGGATCGTCGAACCTCCTTCACATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAGAGAGAGGAAACCTAACCCCTTTCATCTTCCTCCACGCCGGCTGCTCCCCCTTTCAGCAGCAGCACGTTGTCACCGCGCCCGCCGCCGCCGCCGTATTTCTCTC
GTCGTGCCATCGCAGATTTCCTCCTAGCGGATTGCACTGATTTTCTATTCTCTTGTTGTCGTTACTGTTGTAAATTGGTGCCAATTGCTAATATGCCTTGTGAGAAAAGG
AAGAATTCCCAGAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGTGAGGGTAGAAAATTCTGCAGCTTTGGGCATTGATGAAATGAAAAATGTTGAAGATGTTGATAT
TGGCAATGCCAGTTTGTCCGATGTGATGAATGAGAAAGCTCAAGAGCCTCGGGTAATATTTGTTCTAGAAAATGCTCCTTTGCACAAGGGTCTTGTCGGGAAGAAGTGGA
AGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGC
CGAGTTAATAAAGCTGGAAAAGTGGGGGCTGTTTATGTCAAAATTGACGATGGAGTACTATTTGAAATTAAGCCACATGCTCGTATCCCAAGAACATATAATCGCTTTTG
TGGACTCATTTTGGATTTGCTACGGAAGAGATGTATTCGTGCTGAAGATACGAATGAAGTACTTTTTCGTGTACTCAACGAACCATTGTCTCAACATTTACCCAACAACT
CTCGTATTATTGGTATCTCTAATGGTTTGGAAAAGTTGGTTGACATACAGAACTATGTTTCTGCTGCTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCAACGGAT
CATAAGAAAATCAATACGTGTACGGATGACATGATATCAGTTTCACACTATCCGCTGGTCTCCATGAGTTCTGTAGGTATGATTTGTGAAGCATTGGAGCATAAATGGAT
CGTCGAACCTCCTTCACATTGAATACATCACAATTTAGTTGTATTTATATTTCATTAATTTTACTTTAGTTTTAGAAATGTTTAGATTTTTTGTTTTAAAAAACTATTCT
ACTATTGATAATGGCAATTAAATCTTAGGCATTGGCCATACTTCTAATTTTTGGTATATGTAAATAACATATTGCATTTTTTATTATATTTTTAAATGTCGCCGAAATTA
GCCCAACTTAATGGTAATTAGCA
Protein sequenceShow/hide protein sequence
MPCEKRKNSQSSSSKLARLKQVRVENSAALGIDEMKNVEDVDIGNASLSDVMNEKAQEPRVIFVLENAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPL
LDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLRKRCIRAEDTNEVLFRVLNEPLSQHLPNNSRIIGISNGLEKLVDIQNYVSAASDDKNLIF
VVSATDHKKINTCTDDMISVSHYPLVSMSSVGMICEALEHKWIVEPPSH