CuGenDBv2

Gene ID	Tan0019580
Organism	Trichosanthes anguina (Snake gourd v1)
Description	rRNA-processing protein FYV7
Genome location	LG06:7455249..7457659
RNA-Seq Expression	Tan0019580
Synteny	Tan0019580
Gene Ontology terms	NA
InterPro domains	IPR013730 - Fyv7/TAP26

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-77

86.39

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ R KS FM   K+KN KRLGGKG S +AFANAKST+DYYNPALIKKQREFYKNAKHV+K+KKLVKHQN Q+ERPSSS+VGLVEGENEM 
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FENQTNG RG ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

XP_022953215.1 uncharacterized protein LOC111455827 [Cucurbita moschata]

6.8e-77

86.32

Show/hide

Query:  MKKRTGKDEEQNRPKSTFMKN---KNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MKKRTG+DE QNRPKS FMKN   KN KRLGGKGLSLEAFAN KST+DYYNPALIKKQREFYKNAKHVSK+KKLVKHQN  +ERPSSSTVGLVEGEN  K
Subjt:  MKKRTGKDEEQNRPKSTFMKN---KNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN
         ENQTNG RGKERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEEQERAKARRN+ REKM KRT+KGQPVMKYRIEHLL+TIGAS N
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN

XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]

2.4e-77

86.39

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ R KS FM   K+KN KRLGGKG S +AFANAKST+DYYNPALIKKQREFYKNAKHV+K+KKLVKHQN Q+ERPSSS+VGLVEGENEMK
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FEN+TNG RG ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

XP_023004670.1 uncharacterized protein LOC111497895 [Cucurbita maxima]

2.6e-76

85.34

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ R KS F    K+KN KRLGGKG S +AFANAKST+DYYNPA IKKQREFYKNAKHV+K+KKLVKHQN Q+ERPS+STVGLVEGENEMK
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FEN+TNG RG ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

XP_023513566.1 uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo]

2.0e-76

85.86

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ   KS FM   K+KN KRLGGKG S +AFANAKST+DYYNPALIKKQREFYKNAKHV+K+KKLVKHQN Q+ERPSSST+GLVEGENEMK
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FENQTNG RG ERNKGVPSLQGLYERKHQEKEKAR EKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BRH3 uncharacterized protein LOC103492733

2.8e-76

85.86

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK   GK E +NR KS FM   K+ N KRLGGK LSLEAFANAKST+DYYNPALIKKQREFYKNAKHV+K+KKLVKHQNQQ+ERPSSSTVGLVEGENE K
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FENQTNG  GKERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

A0A6J1GP14 uncharacterized protein LOC111455827

3.3e-77

86.32

Show/hide

Query:  MKKRTGKDEEQNRPKSTFMKN---KNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MKKRTG+DE QNRPKS FMKN   KN KRLGGKGLSLEAFAN KST+DYYNPALIKKQREFYKNAKHVSK+KKLVKHQN  +ERPSSSTVGLVEGEN  K
Subjt:  MKKRTGKDEEQNRPKSTFMKN---KNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN
         ENQTNG RGKERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEEQERAKARRN+ REKM KRT+KGQPVMKYRIEHLL+TIGAS N
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN

A0A6J1H9B9 uncharacterized protein LOC111461241

1.1e-77

86.39

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ R KS FM   K+KN KRLGGKG S +AFANAKST+DYYNPALIKKQREFYKNAKHV+K+KKLVKHQN Q+ERPSSS+VGLVEGENEMK
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FEN+TNG RG ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

A0A6J1JPX8 uncharacterized protein LOC111488792

2.0e-74

84.21

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MKKRTG+DE Q+RPKS FM   K+KN KRLGGKG SLEAFAN KST+DYYNPALIKKQREFYKNAKHVSK+KKLVKHQN  +ERPSSST GLVEGEN  K
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN
         ENQTN  RGKERNKG+PSLQ LYERKHQEKEKARMEKEAIIAAKKEEQERAKARRN+ REKM KRT+KGQPVMKYRIEHLL+TIGAS N
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTN

A0A6J1KV89 uncharacterized protein LOC111497895

1.3e-76

85.34

Show/hide

Query:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK
        MK R GKDEEQ R KS F    K+KN KRLGGKG S +AFANAKST+DYYNPA IKKQREFYKNAKHV+K+KKLVKHQN Q+ERPS+STVGLVEGENEMK
Subjt:  MKKRTGKDEEQNRPKSTFM---KNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMK

Query:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH
        FEN+TNG RG ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+ERAKARRNS REKMFKRT+KGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGGRGKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).

1.2e-31

46.93

Show/hide

Query:  DEEQNRPKST-FMKNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMKFENQTNGGR
        D E ++ KS    K KN +RLGG GLSL+ FAN KS ++ YNP+LIKKQ+EFYKNAK+VSKF+K +K QN  D+  +  T  + + +++ K + ++N   
Subjt:  DEEQNRPKST-FMKNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMKFENQTNGGR

Query:  GKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGAS
        G         ++ LY++  +E E+ R E+EA+  AKKE +E A++RR   + KM ++TR GQPVMKYRIEHLLE+I  S
Subjt:  GKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGAS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAAGCGAACCGGCAAAGACGAAGAACAGAATCGGCCGAAATCGACATTTATGAAGAACAAGAACAAGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTT
TGCGAATGCGAAATCAACTTCCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTTTATAAGAATGCTAAACATGTCAGCAAGTTTAAGAAGTTAGTAAAGC
ATCAGAATCAGCAGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGGTGAAAATGAAATGAAATTCGAGAATCAGACGAACGGAGGACGTGGGAAAGAAAGG
AATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGAAGAACAAGA
AAGAGCTAAAGCTAGACGAAACTCCATGAGGGAAAAAATGTTCAAAAGGACTAGAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACTATTGGAG
CCTCAACGAACCACTGA

mRNA sequence

Show/hide mRNA sequence

CCTCTGTTTTGCCCTAATTGTTCTCGATTTCATTCAATCTCTCTGTAAAGTTTCTTTCTAACGATGAAGAAGCGAACCGGCAAAGACGAAGAACAGAATCGGCCGAAATC
GACATTTATGAAGAACAAGAACAAGAAACGATTGGGAGGGAAGGGCCTTTCGCTCGAGGCGTTTGCGAATGCGAAATCAACTTCCGATTACTATAATCCAGCTTTGATAA
AAAAGCAAAGAGAGTTTTATAAGAATGCTAAACATGTCAGCAAGTTTAAGAAGTTAGTAAAGCATCAGAATCAGCAGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTT
GTCGAGGGTGAAAATGAAATGAAATTCGAGAATCAGACGAACGGAGGACGTGGGAAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCA
AGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCAAAAAAGGAAGAACAAGAAAGAGCTAAAGCTAGACGAAACTCCATGAGGGAAAAAATGTTCAAAA
GGACTAGAAAAGGTCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACTATTGGAGCCTCAACGAACCACTGAGGCTTTGGTTGTTTTGACTGGATTTTGTGA
AAGAAAATTTTGTCGCTTTATTTTTGTAGGTATATATATTTCTCTTGTACCTTTTAGTTTGCTCCATTATACAATCCAATTCTAGTGTATTACAGTTTATATTCTAATCT
AAATGATCCATATGCTTGATATTATCATATTGCCGTCCATTTGTATGTGCTTGGATGTAAGTCTCTAAGCTTTTAGTTGAACGTTCAATGAGAAAAGATTCCTGTCTTTT
ACAGTTAGGTGTTTCTTTCTCTTTTTCTCTTTCTTTTTTTTCGAGTTCAGCATGTGGGGC

Protein sequence

Show/hide protein sequence

MKKRTGKDEEQNRPKSTFMKNKNKKRLGGKGLSLEAFANAKSTSDYYNPALIKKQREFYKNAKHVSKFKKLVKHQNQQDERPSSSTVGLVEGENEMKFENQTNGGRGKER
NKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQERAKARRNSMREKMFKRTRKGQPVMKYRIEHLLETIGASTNH

Tan0019580 (gene) of Snake gourd v1 genome