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Tan0019601 (gene) of Snake gourd v1 genome

Gene IDTan0019601
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCold-regulated protein
Genome locationLG04:76403019..76403252
RNA-Seq ExpressionTan0019601
SyntenyTan0019601
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]7.7e-3592.21Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVGVGVPICIECGTHSNPCRC+VVGPTLGFL FAVAAVVEWPVGALV+CF +HKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]1.1e-3390.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRC+VVGPTLGFL FA AAVVEWPVGALVYCF + KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]5.0e-3488.31Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVP+C+ECGTH NPCRC+VVGPTLGFL FAVAAVVEWPVGALVYCF +HKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]3.8e-3489.61Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPIC+ECGTH NPCRC+VVGPTLGFL FAVAAVVEWPVGALVYCF +HKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]2.2e-3490.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        M VG+GVPICIECGTHSNPCRC+VVGPTLGFL FAVAAVVEWPVGALV+CF +HKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein1.1e-3490.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        M VG+GVPICIECGTHSNPCRC+VVGPTLGFL FAVAAVVEWPVGALV+CF +HKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
A0A1S3C5C8 uncharacterized protein LOC1034968423.7e-3592.21Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVGVGVPICIECGTHSNPCRC+VVGPTLGFL FAVAAVVEWPVGALV+CF +HKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
A0A218XJX3 Uncharacterized protein3.3e-3183.12Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MA+GVGVPIC+ECGT SNPCRC+VVGPTLGFL F  AAVVEWP+GALVYCF + KGRRIMAHPATVVYPSV+NA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
A0A6J1CQ64 uncharacterized protein LOC1110132915.4e-3490.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRC+VVGPTLGFL FA AAVVEWPVGALVYCF + KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
A0A6J1FA13 uncharacterized protein LOC1114421902.4e-3488.31Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVP+C+ECGTH NPCRC+VVGPTLGFL FAVAAVVEWPVGALVYCF +HKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein5.4e-2667.61Show/hide
Query:  VPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI
        +PIC++CGT  NPCRC+VVGPTLG + F  A +VEWPVGALVY F + KGRRIM HPAT VYP VS ++PI
Subjt:  VPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCGGAGTCGGCGTTCCGATATGCATCGAGTGTGGGACCCACAGCAATCCATGTCGGTGCAGGGTGGTGGGGCCGACGTTGGGATTCTTGGGCTTCGCGGTGGC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTTTACTGTTTCCACAACCACAAGGGACGCCGCATCATGGCGCATCCGGCCACCGTCGTTTACCCGTCGGTGTCTAATG
CAGTTCCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTCGGAGTCGGCGTTCCGATATGCATCGAGTGTGGGACCCACAGCAATCCATGTCGGTGCAGGGTGGTGGGGCCGACGTTGGGATTCTTGGGCTTCGCGGTGGC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTTTACTGTTTCCACAACCACAAGGGACGCCGCATCATGGCGCATCCGGCCACCGTCGTTTACCCGTCGGTGTCTAATG
CAGTTCCTATTTAA
Protein sequenceShow/hide protein sequence
MAVGVGVPICIECGTHSNPCRCRVVGPTLGFLGFAVAAVVEWPVGALVYCFHNHKGRRIMAHPATVVYPSVSNAVPI