; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019609 (gene) of Snake gourd v1 genome

Gene IDTan0019609
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L22-2
Genome locationLG06:6673075..6674764
RNA-Seq ExpressionTan0019609
SyntenyTan0019609
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]1.1e-5999.21Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]2.8e-5897.62Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]5.6e-5998.41Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]5.6e-5997.62Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]2.5e-5998.41Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein5.5e-6099.21Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A1S3BRQ9 60S ribosomal protein L22-25.5e-6099.21Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A5D3D2W6 60S ribosomal protein L22-2-like5.5e-6099.21Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1DLK6 60S ribosomal protein L22-25.5e-6099.21Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1JVR1 60S ribosomal protein L22-2-like2.7e-5997.62Show/hide
Query:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L223.5e-3263.64Show/hide
Query:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K
Subjt:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK

Query:  DRNVYELRYFNIAENEGEEED
        +   YELRYF I ++E EEED
Subjt:  DRNVYELRYFNIAENEGEEED

Q98TF8 60S ribosomal protein L226.1e-3261.11Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        + + AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        +A++K+   YELRYF I ++E EEE+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-32.6e-5182.4Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENE EEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-22.4e-5284Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENEGEEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-11.9e-4170.49Show/hide
Query:  GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN
        GA S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASN
Subjt:  GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN

Query:  KDRNVYELRYFNIAENEGEEED
        KD+NVYE+RYF I +     E+
Subjt:  KDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.3e-4270.49Show/hide
Query:  GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN
        GA S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASN
Subjt:  GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN

Query:  KDRNVYELRYFNIAENEGEEED
        KD+NVYE+RYF I +     E+
Subjt:  KDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family1.7e-5384Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENEGEEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family1.7e-5384Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENEGEEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family1.7e-5384Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENEGEEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family1.9e-5282.4Show/hide
Query:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVI
Subjt:  MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  ASNKDRNVYELRYFNIAENEGEEED
        A+NKDRN+YELRYFNIAENE EEED
Subjt:  ASNKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCATCTGGTGGTCCGAAGGGGAAGAAGAAGGGAGTGACGTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCCTT
AGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGATTCGGTTACCGTCACTCGGGACAAGAACAAGATCACCGTCAACTCCGATAGCA
ACTTCTCCAAGAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTATGAA
TTGAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAATAGACCTATCTCCTTCGAGCTTTAAAAGACCAACTCATAACCCTAAAATCAGCGCCGATTGTTGTATACACATCTGCAGGAAATTAGGGCAACGAGTTGCAGAG
CAGAAGCAAAAATGAGCCGTGGAGCAGCATCTGGTGGTCCGAAGGGGAAGAAGAAGGGAGTGACGTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGAC
ATCGCCTCCTTAGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGATTCGGTTACCGTCACTCGGGACAAGAACAAGATCACCGTCAA
CTCCGATAGCAACTTCTCCAAGAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCA
ACGTCTATGAATTGAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAAGAAGATTGAGGTTCAAGTCCTTTATTTTGGAAGCATCGTTTGCAGTAGGATTATTAGTTG
TAGTGGCCTTTCTCATATTAAGGTTGTTGAAATTATCTCCATAGATTGTCTTGAAGCTTTCCATATAGATCAGCCAAGGCTTTGAGTTATGAGATGATGCAACTCTTGTT
TACTTCTGAAGTTTTAATATCCATAAATTTTGTTCACGTAGCTCCTTTCTTTTGGTTGCTTTGAAGGTATTTTTATTGCTCTGAGGATATTGATGTTGTCTTAGAAAAAT
GATGTGTATTTGGTCTGATTTGATGGTTGTTATATTTGCATTCCTGTACTTTTTAACTACAAAAGTTAAACTTGCCCAATTGTTAAATTTGGCTTTGTTAATGTCATGGT
GACATTGCAGGGAGATGCAATTCTGTGTTCAGTACCTTAAGAATTTTCAATTTTGTATCCAACACGGTCTAATTTGACATTTTTTTTTTAAAAAAATTCAGACTTATTAG
ATA
Protein sequenceShow/hide protein sequence
MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYE
LRYFNIAENEGEEED