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Tan0019615 (gene) of Snake gourd v1 genome

Gene IDTan0019615
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationLG11:15794259..15795616
RNA-Seq ExpressionTan0019615
SyntenyTan0019615
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]6.7e-4467.97Show/hide
Query:  LNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNV
        +N L SFI  IN+RN  I       + LPICI MQ+  P  ++ +  N+GKTILGLTFQAVLALFI++PNSSPPLLTHLF AAVLISFAVSFA +FLQN 
Subjt:  LNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNV

Query:  FPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        FPR+A LFEKIGAL AAIGVCI++S LL+HQNFAWI WLA  FSL+ FVLSF+
Subjt:  FPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3464.39Show/hide
Query:  FSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNVFPRLARLFEKIGALFAAIGV
        FSTP DCLPI  R ++QR +P      N+GK I+GLT QA+LA+FIS+P+SSPPLL  LFGA + ISF +SFA +FL+N FP+ ARLFEK+GALFAAIGV
Subjt:  FSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNVFPRLARLFEKIGALFAAIGV

Query:  CIISSLLLVHQNFAWICWLACAFSLIVFVLSF
         II+S LL+H+N+AWI  LAC FSLIVF LS+
Subjt:  CIISSLLLVHQNFAWICWLACAFSLIVFVLSF

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]4.3e-4363.41Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFA
        M S+S Q  +D+N L S I +IN+RN  I       + LPICI MQ   P  ++ +  N+G TILGLTFQAVLALFI++  SSPPLLTHLFGAAVLISFA
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFA

Query:  VSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        VSF  +FLQ+ FPR+A LFEKIGAL AAIGVCI++S LL+HQNFAWI WLAC FSL+ F+LSF+
Subjt:  VSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]2.3e-5269.7Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIST-PNSSPPLLTHLFGAAVLISF
        M STSHQT +D++A SSFI TI+QRNYG+    TPS+CLP+ IRMQQ  PQ  A S   LGK IL L+FQAVLALFIS+ P S PPLL H F AAV ISF
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIST-PNSSPPLLTHLFGAAVLISF

Query:  AVSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        AVSFA+LFL N FPR A LFEK+GALF+A GVC I+S LLVHQNFAWICW+AC FS+IVF LSFK
Subjt:  AVSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]3.7e-3471.65Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIF------STPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAA
        M ST  QT VD+NALSSFI  IN+RN GIS F      STPSDCLPICIRM  QRP PA +S  +LGKTILGLTFQAVLALFIS P+S P L T LFGAA
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIF------STPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAA

Query:  VLISFAVSFASLFLQNVFPRLARLFEK
        VLISFAVSFA LFLQ  +PR+A LFEK
Subjt:  VLISFAVSFASLFLQNVFPRLARLFEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein2.1e-4363.41Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFA
        M S+S Q  +D+N L S I +IN+RN  I       + LPICI MQ   P  ++ +  N+G TILGLTFQAVLALFI++  SSPPLLTHLFGAAVLISFA
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFA

Query:  VSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        VSF  +FLQ+ FPR+A LFEKIGAL AAIGVCI++S LL+HQNFAWI WLAC FSL+ F+LSF+
Subjt:  VSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

A0A0A0KJP2 Uncharacterized protein1.1e-5269.7Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIST-PNSSPPLLTHLFGAAVLISF
        M STSHQT +D++A SSFI TI+QRNYG+    TPS+CLP+ IRMQQ  PQ  A S   LGK IL L+FQAVLALFIS+ P S PPLL H F AAV ISF
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIST-PNSSPPLLTHLFGAAVLISF

Query:  AVSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        AVSFA+LFL N FPR A LFEK+GALF+A GVC I+S LLVHQNFAWICW+AC FS+IVF LSFK
Subjt:  AVSFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

A0A0A0KQ03 Uncharacterized protein2.5e-2848.47Show/hide
Query:  HQTYVDLNALSSFIPTINQRNYGISIFS---TPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIS-TPNSSPPLLTHLFGAAVLISFAV
        H+  +D+N L+S I  +  RN GIS  +     SDCLPI I+MQ    +P+  + P  G T L LTFQA++ LF+S  P+SS PL + LF A +L SF  
Subjt:  HQTYVDLNALSSFIPTINQRNYGISIFS---TPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFIS-TPNSSPPLLTHLFGAAVLISFAV

Query:  SFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        S+  + LQ  FP+ A+L +  GALFAAIG CII SLLL + NF WICWLA    L  F++SFK
Subjt:  SFASLFLQNVFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter3.2e-4467.97Show/hide
Query:  LNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNV
        +N L SFI  IN+RN  I       + LPICI MQ+  P  ++ +  N+GKTILGLTFQAVLALFI++PNSSPPLLTHLF AAVLISFAVSFA +FLQN 
Subjt:  LNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQNV

Query:  FPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK
        FPR+A LFEKIGAL AAIGVCI++S LL+HQNFAWI WLA  FSL+ FVLSF+
Subjt:  FPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK

A0A6J1CY58 uncharacterized protein LOC1110156581.8e-3471.65Show/hide
Query:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIF------STPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAA
        M ST  QT VD+NALSSFI  IN+RN GIS F      STPSDCLPICIRM  QRP PA +S  +LGKTILGLTFQAVLALFIS P+S P L T LFGAA
Subjt:  MPSTSHQTYVDLNALSSFIPTINQRNYGISIF------STPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAA

Query:  VLISFAVSFASLFLQNVFPRLARLFEK
        VLISFAVSFA LFLQ  +PR+A LFEK
Subjt:  VLISFAVSFASLFLQNVFPRLARLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAACTTCACACCAAACCTATGTGGATCTCAATGCCCTTTCTTCCTTTATCCCTACAATTAATCAAAGAAACTATGGAATCAGCATTTTTTCCACACCATCAGA
TTGCCTTCCAATTTGCATCAGAATGCAGCAGCAGAGGCCTCAACCAGCAGCCACTAGCCCTCCGAATCTTGGGAAGACCATTCTTGGCCTTACATTTCAAGCAGTTTTGG
CCTTGTTCATTAGCACACCAAATTCATCTCCTCCACTTTTGACACATCTTTTTGGTGCTGCTGTGTTGATTAGCTTTGCAGTTTCATTTGCAAGTCTTTTCCTTCAAAAT
GTGTTCCCGAGACTCGCACGTTTGTTCGAAAAGATCGGTGCCCTTTTCGCTGCAATTGGTGTGTGCATCATATCAAGTCTTCTTCTTGTTCATCAGAACTTTGCTTGGAT
CTGTTGGTTGGCTTGTGCCTTCTCCTTGATTGTCTTTGTTCTATCATTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTAATTCAATGACTTGCCATGATACTAGTATTTAAATGATGACTTGAAATGTCTATTAGAAAAATATGAACTGATTTGATATGATGTAGTAGACAATTATTAAAAGAA
CTTAAACAAAGTGAAATATAGATCGACAATTTAGGAAAAGGAAATTTTGATATATTGCTTAGAGAAAAAAGAGAGTATGTTGCATATGACCCGACATTAACAGTTAACTA
TATTCAAATTCACAATATGTGACATGATAGTGTAAAACAGATGAGACTAAATTGAATCACAAATAAAAATTCTAAGGACAAACAAGATTTTAAAAAATGAGACACAACTA
GAATTCAATAAATTAAAATTAAAACTTTTTCTTTTTTCTTTTGAAGAATATCACAGAAAGATCCTAACCAACTATAACTTTAACCCTTACAAACTAACTTTCCTAGAAAA
ATTGAAGACAAAAAAGAAAGAAATTTCTTTGAACAAGCTAAATCTTTTCAGAAAACATGTATGTCCAAGCTCTCTTATCCTTCACATTCACACTCCAATGACCAAGTAAG
TACCATGAAAGTACAATTGAAGTAATGATAGTGTATGAAAGGGAAGGAATAGTCAAACAACATGGCTCAAAAAGTTAGAGGAAAAAAACCACTCCCTACAATTTCTTGGC
AACTTATTCTTTAACTTGTAATAGAATTACAATAAATAAAATAAAAGAAATTGTAGTAGAATCACAGAAAATTCTCTCTTTATATTCTAGAATACTCCAAACAACATTAA
AATGGAAACAAATCAATACTAAATTGGTCCAAGGGAAACCCCTTGAAAGTATTGAGAAAATTTTCCAATTTTTTTTTCTTGTTCTGTTTCCCAATGCCTTCAACTTCACA
CCAAACCTATGTGGATCTCAATGCCCTTTCTTCCTTTATCCCTACAATTAATCAAAGAAACTATGGAATCAGCATTTTTTCCACACCATCAGATTGCCTTCCAATTTGCA
TCAGAATGCAGCAGCAGAGGCCTCAACCAGCAGCCACTAGCCCTCCGAATCTTGGGAAGACCATTCTTGGCCTTACATTTCAAGCAGTTTTGGCCTTGTTCATTAGCACA
CCAAATTCATCTCCTCCACTTTTGACACATCTTTTTGGTGCTGCTGTGTTGATTAGCTTTGCAGTTTCATTTGCAAGTCTTTTCCTTCAAAATGTGTTCCCGAGACTCGC
ACGTTTGTTCGAAAAGATCGGTGCCCTTTTCGCTGCAATTGGTGTGTGCATCATATCAAGTCTTCTTCTTGTTCATCAGAACTTTGCTTGGATCTGTTGGTTGGCTTGTG
CCTTCTCCTTGATTGTCTTTGTTCTATCATTCAAGTGA
Protein sequenceShow/hide protein sequence
MPSTSHQTYVDLNALSSFIPTINQRNYGISIFSTPSDCLPICIRMQQQRPQPAATSPPNLGKTILGLTFQAVLALFISTPNSSPPLLTHLFGAAVLISFAVSFASLFLQN
VFPRLARLFEKIGALFAAIGVCIISSLLLVHQNFAWICWLACAFSLIVFVLSFK