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Tan0019631 (gene) of Snake gourd v1 genome

Gene IDTan0019631
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHomeobox domain-containing protein
Genome locationLG02:76949650..76950888
RNA-Seq ExpressionTan0019631
SyntenyTan0019631
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060995.1 hypothetical protein E6C27_scaffold501G001300 [Cucumis melo var. makuwa]3.6e-2296.55Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERF
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATKSE F
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERF

KAF3975862.1 hypothetical protein CMV_000902 [Castanea mollissima]7.6e-1270.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK
        MVLRRPG NRS NRENPDILIMM A  QI+RG  +DKG+  E++GMGPLKP T+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK

KAG6674396.1 hypothetical protein I3842_15G039000 [Carya illinoinensis]4.9e-1168.52Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK
        M LRRPG NRS NRENPDILI+MIA +QI+RG  +DKGD  +R+GMGPLK A +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK

KAG7029268.1 hypothetical protein SDJN02_07606, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2094.64Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSE
        MVLRR GRNRSFNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKP TKSE
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSE

KGN62652.2 hypothetical protein Csa_018750 [Cucumis sativus]1.0e-2476.83Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERFGGGFHSEFLILFWMTKIYYQIEGW
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATK +    GF S+FLIL+ MT+I+    G+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERFGGGFHSEFLILFWMTKIYYQIEGW

TrEMBL top hitse value%identityAlignment
A0A0A0LN23 Uncharacterized protein4.9e-2578.31Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERFGGGFHSEFLILFWMTKIYYQIEGWK
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATK +    GF S+FLIL+ MT+I +Q+E  K
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERFGGGFHSEFLILFWMTKIYYQIEGWK

A0A0R0JC99 Uncharacterized protein5.0e-0970.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK
        M LR P  NRS NRENPDIL MMIA  QIIRG E DK D  ERK MGP+KPAT+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATK

A0A5A7V591 Uncharacterized protein1.8e-2296.55Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERF
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKPATKSE F
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERF

A0A6A4PQS0 Putative transcription factor Homeodomain-TALE-BEL family2.9e-0969.09Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTER-KGMGPLKPATK
        M LR    NRS NRENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTER-KGMGPLKPATK

A0A6A5PA14 Homeobox domain-containing protein2.9e-0969.09Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTER-KGMGPLKPATK
        M LR    NRS NRENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTER-KGMGPLKPATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCGCGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGCATGGGCCCTCTAAAGCCTGCAACAAAGAGTGAAAGATTTGGTGGGGGCTTTCACTCTGAGTTTCTCATCCTATTTTGGATGACAA
AGATCTATTATCAAATTGAAGGTTGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCGCGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGCATGGGCCCTCTAAAGCCTGCAACAAAGAGTGAAAGATTTGGTGGGGGCTTTCACTCTGAGTTTCTCATCCTATTTTGGATGACAA
AGATCTATTATCAAATTGAAGGTTGGAAATAA
Protein sequenceShow/hide protein sequence
MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGREQDKGDGTERKGMGPLKPATKSERFGGGFHSEFLILFWMTKIYYQIEGWK