; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019645 (gene) of Snake gourd v1 genome

Gene IDTan0019645
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor bHLH3
Genome locationLG07:73845847..73847548
RNA-Seq ExpressionTan0019645
SyntenyTan0019645
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2056935.1 hypothetical protein ES319_A11G138200v1 [Gossypium barbadense]8.3e-0853.97Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  +    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

MBA0715293.1 hypothetical protein [Gossypium laxum]2.8e-0855.56Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  D    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

TXG63783.1 hypothetical protein EZV62_010777 [Acer yangbiense]4.0e-1053.33Show/hide
Query:  FISAKRPLKEDQWRN-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPPPPPSF
        F++A RPL+ DQW N     L  QSLQ+ P+PPSG NPC+NIPGQG+  C L+G N AG    R ++ PP  PSF
Subjt:  FISAKRPLKEDQWRN-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPPPPPSF

XP_012490670.1 PREDICTED: uncharacterized protein LOC105803178 [Gossypium raimondii]8.3e-0853.97Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  +    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]4.8e-0856.92Show/hide
Query:  SAKRPLKEDQW--RNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPP
        +A R L E+QW  +NLI QSLQR PVPPSG NPCT IPG+    C LS M+VAG   R P+   P
Subjt:  SAKRPLKEDQW--RNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPP

TrEMBL top hitse value%identityAlignment
A0A0D2SB73 Uncharacterized protein4.0e-0853.97Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  +    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

A0A2P5VRW0 Uncharacterized protein4.0e-0853.97Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  +    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

A0A5C7I2P2 Uncharacterized protein1.9e-1053.33Show/hide
Query:  FISAKRPLKEDQWRN-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPPPPPSF
        F++A RPL+ DQW N     L  QSLQ+ P+PPSG NPC+NIPGQG+  C L+G N AG    R ++ PP  PSF
Subjt:  FISAKRPLKEDQWRN-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPPPPPSF

A0A5D2IME2 Uncharacterized protein4.0e-0853.97Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  +    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

A0A7J8ZTZ5 Uncharacterized protein1.4e-0855.56Show/hide
Query:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP
        + A RPL  D    L+ QSL R PV PSGPNPCTNIPG+G   C L  +NVAG V+  P+V P
Subjt:  ISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06137.1 unknown protein3.5e-0452.5Show/hide
Query:  TFISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPG
        T + A RPL+ D     + Q LQR  V  SGPN CTNIPG
Subjt:  TFISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTACATTTATAAGTGCGAAGAGACCATTGAAAGAAGATCAATGGCGGAATTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCGCCGTCGGGGCCGAACCC
ATGTACCAATATTCCCGGACAAGGGAATGTTCCCTGTGCGTTGAGCGGCATGAACGTCGCCGGCGCCGTTCTCCGGCGACCATCTGTACTTCCACCGCCGCCGCCATCTT
TTGATTCCTTGTCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTACATTTATAAGTGCGAAGAGACCATTGAAAGAAGATCAATGGCGGAATTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCGCCGTCGGGGCCGAACCC
ATGTACCAATATTCCCGGACAAGGGAATGTTCCCTGTGCGTTGAGCGGCATGAACGTCGCCGGCGCCGTTCTCCGGCGACCATCTGTACTTCCACCGCCGCCGCCATCTT
TTGATTCCTTGTCTGGATGA
Protein sequenceShow/hide protein sequence
MLITFISAKRPLKEDQWRNLISQSLQRAPVPPSGPNPCTNIPGQGNVPCALSGMNVAGAVLRRPSVLPPPPPSFDSLSG