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Tan0019669 (gene) of Snake gourd v1 genome

Gene IDTan0019669
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:16254882..16259524
RNA-Seq ExpressionTan0019669
SyntenyTan0019669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3069.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKN+NKKKRS AISMDITEN+  ELPQAMDVSESAVHKPASGALNL                           KLK+GRP+KRSKNVRKT A AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        +EQSAEKILKNQ KTTRI SAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]2.9e-3169.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKNRNKKKR  A+SMD+TENSVHELPQAMDVS S VHKPASGAL+L                           KLK+GRP+KRSKNVRKTKA+AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        SEQS EKILKNQ KTTRIQSAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]2.5e-3069.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKN+NKKKRS AISMDITEN+  ELPQAMDVSESAVHKPASGALNL                           KLK+GRP+KRSKNVRKT A AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        +EQSAEKILKNQ KTTRI SAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

XP_023538255.1 uncharacterized protein LOC111799087 [Cucurbita pepo subsp. pepo]1.4e-3072.66Show/hide
Query:  MAKNRNKKKR-SEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKR-GRPLKRSKNVRKTKAMAKAI
        MAKNRNKKK+ S AISMDITENSVHELPQAMDVSESAVHKPASGALNL                           KLK+ GR +KRSKNVRKTKAMAKAI
Subjt:  MAKNRNKKKR-SEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKR-GRPLKRSKNVRKTKAMAKAI

Query:  SKSEQSAEKILKNQGKTTRIQSAKTLYE
        SKSEQSAEKILKNQGKTTRI SAKTLYE
Subjt:  SKSEQSAEKILKNQGKTTRIQSAKTLYE

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]1.7e-3169.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKNRNKKKRS  +SMD+TEN+VHELPQAMDVSESAVHKP SGALNL                           KLK+GRP+KRSKNVRKTKAMAKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        SEQS EKILKNQ KT RIQSAK LYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1S3BUB2 uncharacterized protein LOC1034933621.4e-3169.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKNRNKKKR  A+SMD+TENSVHELPQAMDVS S VHKPASGAL+L                           KLK+GRP+KRSKNVRKTKA+AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        SEQS EKILKNQ KTTRIQSAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

A0A6A6MLZ5 Uncharacterized protein1.9e-2055.56Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKNRNKKK++ A+SMDITE +V ++PQAMD SES V K ASG  N                           RK+K GRP+KRSKNVRK KA+AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        +EQS EK+LKN+ KT R QSAK LY+
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

A0A6J1CP23 uncharacterized protein LOC1110127891.3e-2162.39Show/hide
Query:  MDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISKSEQSAEKILKNQGKT
        MD+TEN+V +LPQAMDVSES VHKP SG LNL                           KL++GRP+KRS+NVRKTKAMAKAI KSEQSAEKI+KNQ KT
Subjt:  MDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISKSEQSAEKILKNQGKT

Query:  TRIQSAKTL
        TRIQSAKTL
Subjt:  TRIQSAKTL

A0A6J1EMH0 uncharacterized protein LOC1114358671.2e-3069.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKN+NKKKRS AISMDITEN+  ELPQAMDVSESAVHKPASGALNL                           KLK+GRP+KRSKNVRKT A AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        +EQSAEKILKNQ KTTRI SAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833161.3e-2969.05Show/hide
Query:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK
        MAKN+N KKRS AISMDITEN+ HELPQAMDVSESAVHKPASGALNL                           KLK+GRP+KRSKNVRKT A AKAISK
Subjt:  MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISK

Query:  SEQSAEKILKNQGKTTRIQSAKTLYE
        +EQSAEKILKNQ KTTRI SAKTLYE
Subjt:  SEQSAEKILKNQGKTTRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27380.1 unknown protein2.8e-0835.67Show/hide
Query:  MAKNRNKKKRSEAISMDITEN-SVHE-LPQAMDVSESAVHKPASGALNLF-----------------------------GSCDLVGSQGTIPTLKWTLYF
        M K RNKK R E  SMD++E+ SV E  PQ MD +E+   K AS A +L                              G   L    G +     T Y 
Subjt:  MAKNRNKKKRSEAISMDITEN-SVHE-LPQAMDVSESAVHKPASGALNLF-----------------------------GSCDLVGSQGTIPTLKWTLYF

Query:  RTQARKLKRGRPLKRSKNVRKTKAMAKAISKSEQSAEKILKNQGKTTRIQSAKTLYE
        +  A   +    +KR+KN RK KA+AKAI+ SE+   K  K++ KT R  SAK LYE
Subjt:  RTQARKLKRGRPLKRSKNVRKTKAMAKAISKSEQSAEKILKNQGKTTRIQSAKTLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAACAGGAATAAGAAGAAGCGAAGTGAGGCTATTTCAATGGACATAACCGAAAATTCTGTTCACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGT
TCATAAACCAGCTTCTGGCGCTCTCAATCTATTCGGCTCGTGTGATCTGGTCGGATCTCAAGGAACGATTCCAACGCTAAAATGGACCTTGTATTTTCGAACTCAAGCGA
GAAAGTTGAAAAGGGGAAGACCATTGAAGAGATCAAAGAATGTTAGGAAAACAAAAGCCATGGCAAAAGCTATTTCTAAGAGCGAGCAGTCAGCCGAGAAAATATTGAAA
AATCAGGGCAAAACTACCAGAATACAGTCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
TGGGGAGGCTTCTTCTAGCTTCTTGCGTTTTTTCGTCTTAGGGTTTTCGTCTTCAATCTCCGCAGCTCTTATCCCTCGGCGATGGCGAAGAACAGGAATAAGAAGAAGCG
AAGTGAGGCTATTTCAATGGACATAACCGAAAATTCTGTTCACGAGCTCCCTCAAGCGATGGACGTGTCTGAGTCTGCAGTTCATAAACCAGCTTCTGGCGCTCTCAATC
TATTCGGCTCGTGTGATCTGGTCGGATCTCAAGGAACGATTCCAACGCTAAAATGGACCTTGTATTTTCGAACTCAAGCGAGAAAGTTGAAAAGGGGAAGACCATTGAAG
AGATCAAAGAATGTTAGGAAAACAAAAGCCATGGCAAAAGCTATTTCTAAGAGCGAGCAGTCAGCCGAGAAAATATTGAAAAATCAGGGCAAAACTACCAGAATACAGTC
TGCAAAAACATTGTATGAATGATACAGCATTTAGCCAGATCATTTTTGTAGAAATATGCTCTTAAATTGTAAAATTGATTTATTTTTGTTCCCTTCATAGGTTTTTATGT
TATTTTCTCCCCCCATTTAGTGTATCAACCCTGCAACTTCCAAATTCCAAGTCACTAGAGAAATCCAACCTACTGTCATTTATTTGTTGTAGCGAAGGAATTATCTATTT
TCAAGTCTATCATCACTAGCAATAAGCATTAGGAGCTGGAAATTTAAAACGGTAGGGATCTTTCTAGAATTTAAGAACATGATTTTTTTTTTTTGTTAAAACTATAGATA
TGATATTGTTTTTTGTTAAATTGGTCAATTATCAGGTTTAAATTCTATTTTGGTTTTTGTAGTTAGAGTTTGG
Protein sequenceShow/hide protein sequence
MAKNRNKKKRSEAISMDITENSVHELPQAMDVSESAVHKPASGALNLFGSCDLVGSQGTIPTLKWTLYFRTQARKLKRGRPLKRSKNVRKTKAMAKAISKSEQSAEKILK
NQGKTTRIQSAKTLYE