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Tan0019695 (gene) of Snake gourd v1 genome

Gene IDTan0019695
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlysine-rich arabinogalactan protein 19-like
Genome locationLG02:92762954..92763361
RNA-Seq ExpressionTan0019695
SyntenyTan0019695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6J1FFR5 lysine-rich arabinogalactan protein 19-like6.0e-0439.46Show/hide
Query:  STFAFALFFALVACSASPLSPGPAPAQ---RHPP-------------TRPASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPPAPPTTPVTPPAT
        S F F +  AL+A S    +PG APA    + PP             T PAS PSS LAP+      AA  P   + PPA++P  SPPAPPT P   PA 
Subjt:  STFAFALFFALVACSASPLSPGPAPAQ---RHPP-------------TRPASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPPAPPTTPVTPPAT

Query:  AIIPPASIANPPELSPPPPSAPGNGAASINVRRCGYLAAVLFVVAAT
          +P  SI+ PP L+P P S PGNG A   V R     +++  V ++
Subjt:  AIIPPASIANPPELSPPPPSAPGNGAASINVRRCGYLAAVLFVVAAT
A0A7J7D0E7 Uncharacterized protein7.8e-0439.46Show/hide
Query:  MAFSTFAFALFFALVACSASPLSPG--PAPAQRHPPTR---------PASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPPAPPTTPVTPPATAI
        MA+ST    + FALVA S    +PG  P PA +  P           PA+PP+  LAPT      ++ P  + + PP+ APTASPP PP  P + P+T+ 
Subjt:  MAFSTFAFALFFALVACSASPLSPG--PAPAQRHPPTR---------PASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPPAPPTTPVTPPATAI

Query:  IPPASIANPPELSPPPP-SAPGNGAASINVRRCGYLAAVLFVVAATM
          PA+  + P  SP  P SAPGNG +   V   G +A + FV A  M
Subjt:  IPPASIANPPELSPPPP-SAPGNGAASINVRRCGYLAAVLFVVAATM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68725.1 arabinogalactan protein 195.9e-0441.3Show/hide
Query:  SPLSPGPAPAQRHPPTRPASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPP--APPTTPVTPPATAIIPPASIANPPELSPPPPSAP
        S   P  +P    P   P SPP+ ++AP + P   A  PP     PPA APT SPP  +PP  P +PP T   PP + A+PP     PP AP
Subjt:  SPLSPGPAPAQRHPPTRPASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPP--APPTTPVTPPATAIIPPASIANPPELSPPPPSAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCTACCTTCGCCTTCGCGCTATTCTTCGCTTTAGTAGCTTGTTCTGCCTCTCCTCTGTCTCCGGGACCGGCGCCGGCTCAGCGACATCCACCGACTCGGCC
CGCCAGTCCGCCATCGTCGAGGCTGGCCCCGACCTTGCCTCCAAAGGTTTCGGCGGCTCTCCCTCCGATGGCCAAGTCCCATCCGCCGGCACTGGCTCCGACCGCTTCTC
CTCCAGCTCCGCCTACGACTCCTGTAACCCCTCCTGCGACTGCGATCATCCCTCCGGCGTCGATTGCGAACCCTCCGGAATTAAGCCCACCACCACCGTCGGCTCCCGGC
AATGGCGCCGCATCAATCAATGTTCGCCGGTGTGGATATCTTGCTGCAGTTCTCTTCGTTGTGGCCGCGACGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTTCTACCTTCGCCTTCGCGCTATTCTTCGCTTTAGTAGCTTGTTCTGCCTCTCCTCTGTCTCCGGGACCGGCGCCGGCTCAGCGACATCCACCGACTCGGCC
CGCCAGTCCGCCATCGTCGAGGCTGGCCCCGACCTTGCCTCCAAAGGTTTCGGCGGCTCTCCCTCCGATGGCCAAGTCCCATCCGCCGGCACTGGCTCCGACCGCTTCTC
CTCCAGCTCCGCCTACGACTCCTGTAACCCCTCCTGCGACTGCGATCATCCCTCCGGCGTCGATTGCGAACCCTCCGGAATTAAGCCCACCACCACCGTCGGCTCCCGGC
AATGGCGCCGCATCAATCAATGTTCGCCGGTGTGGATATCTTGCTGCAGTTCTCTTCGTTGTGGCCGCGACGATGTAA
Protein sequenceShow/hide protein sequence
MAFSTFAFALFFALVACSASPLSPGPAPAQRHPPTRPASPPSSRLAPTLPPKVSAALPPMAKSHPPALAPTASPPAPPTTPVTPPATAIIPPASIANPPELSPPPPSAPG
NGAASINVRRCGYLAAVLFVVAATM