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Tan0019707 (gene) of Snake gourd v1 genome

Gene IDTan0019707
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDouble Clp-N motif-containing protein
Genome locationLG02:59935215..59937422
RNA-Seq ExpressionTan0019707
SyntenyTan0019707
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4073829.1 unnamed protein product [Lactuca saligna]3.0e-1948.3Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA--------VTRVRFFTNFLNVDKDEAAS----------------------RRT
        SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVY+QNTSPKA          ++R   ++    K+ A S                      R T
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA--------VTRVRFFTNFLNVDKDEAAS----------------------RRT

Query:  SRCHRFGREARKASRKGDKKRLSRGDSVIIMNVEEWGILLIRPIPMF
         R     R+A    R+   +   RGD V +MNVEEWGI L+   PMF
Subjt:  SRCHRFGREARKASRKGDKKRLSRGDSVIIMNVEEWGILLIRPIPMF

CAB4076294.1 unnamed protein product [Lactuca saligna]1.5e-2159.83Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKAVTRVRFFTNFLNVDKDEAASRRTSRCHRFGREARKASRKGDKKRLSRGDSVII
        SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVY+QNTSPKA  R    T  L  ++ +A S          REA +A          RGD V +
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKAVTRVRFFTNFLNVDKDEAASRRTSRCHRFGREARKASRKGDKKRLSRGDSVII

Query:  MNVEEWGILLIRPIPMF
        MNVEEWGI L+   PMF
Subjt:  MNVEEWGILLIRPIPMF

CAB4277269.1 unnamed protein product [Prunus armeniaca]1.4e-1687.04Show/hide
Query:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA
        +S   L SNWGSKSTKFDDLLRERR+KSMLLKTLQHMSGRPPLIVYKQNTSP+A
Subjt:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA

THU42931.1 hypothetical protein C4D60_Mb00t04690 [Musa balbisiana]5.3e-1697.83Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPK
        SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVY+QNTSPK
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPK

TYK11533.1 hypothetical protein E5676_scaffold81877G00010 [Cucumis melo var. makuwa]3.1e-1688.89Show/hide
Query:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA
        +S   L SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVYKQNTSPKA
Subjt:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA

TrEMBL top hitse value%identityAlignment
A0A4S8I5D0 Uncharacterized protein2.6e-1697.83Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPK
        SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVY+QNTSPK
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPK

A0A5D3CHZ3 Uncharacterized protein1.5e-1688.89Show/hide
Query:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA
        +S   L SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVYKQNTSPKA
Subjt:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA

A0A6J5X5I1 Uncharacterized protein6.8e-1787.04Show/hide
Query:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA
        +S   L SNWGSKSTKFDDLLRERR+KSMLLKTLQHMSGRPPLIVYKQNTSP+A
Subjt:  VSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA

A0A6S7KSU9 Uncharacterized protein1.5e-1948.3Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA--------VTRVRFFTNFLNVDKDEAAS----------------------RRT
        SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVY+QNTSPKA          ++R   ++    K+ A S                      R T
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKA--------VTRVRFFTNFLNVDKDEAAS----------------------RRT

Query:  SRCHRFGREARKASRKGDKKRLSRGDSVIIMNVEEWGILLIRPIPMF
         R     R+A    R+   +   RGD V +MNVEEWGI L+   PMF
Subjt:  SRCHRFGREARKASRKGDKKRLSRGDSVIIMNVEEWGILLIRPIPMF

A0A6S7LAG4 Uncharacterized protein7.0e-2259.83Show/hide
Query:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKAVTRVRFFTNFLNVDKDEAASRRTSRCHRFGREARKASRKGDKKRLSRGDSVII
        SNWGSKSTKFDDLLRERRSKSMLLKTLQ MSGRPPLIVY+QNTSPKA  R    T  L  ++ +A S          REA +A          RGD V +
Subjt:  SNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKAVTRVRFFTNFLNVDKDEAASRRTSRCHRFGREARKASRKGDKKRLSRGDSVII

Query:  MNVEEWGILLIRPIPMF
        MNVEEWGI L+   PMF
Subjt:  MNVEEWGILLIRPIPMF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATAACAATGCCCGAGCTCCCGCTTTGCTTGCGTTCTTCACCGCGCTTGTCGGGGATGTATCACTTATCCCGCTCCTAAGCAATTGGGGATCAAAAAGCACCAA
ATTTGATGACTTATTAAGGGAAAGACGAAGTAAGAGCATGCTATTGAAGACATTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACAAACAAAATACGAGTCCAA
AGGCAGTCACCAGAGTCCGCTTTTTTACAAACTTCTTAAATGTCGACAAGGACGAGGCGGCGTCAAGGAGAACGTCGAGATGCCATCGGTTTGGGCGCGAGGCTCGCAAA
GCTTCCCGCAAAGGAGATAAGAAAAGGCTCAGCAGAGGAGATTCGGTAATCATTATGAATGTTGAGGAGTGGGGCATTTTGCTCATTCGTCCCATCCCAATGTTCGAGAC
GGACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATAACAATGCCCGAGCTCCCGCTTTGCTTGCGTTCTTCACCGCGCTTGTCGGGGATGTATCACTTATCCCGCTCCTAAGCAATTGGGGATCAAAAAGCACCAA
ATTTGATGACTTATTAAGGGAAAGACGAAGTAAGAGCATGCTATTGAAGACATTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACAAACAAAATACGAGTCCAA
AGGCAGTCACCAGAGTCCGCTTTTTTACAAACTTCTTAAATGTCGACAAGGACGAGGCGGCGTCAAGGAGAACGTCGAGATGCCATCGGTTTGGGCGCGAGGCTCGCAAA
GCTTCCCGCAAAGGAGATAAGAAAAGGCTCAGCAGAGGAGATTCGGTAATCATTATGAATGTTGAGGAGTGGGGCATTTTGCTCATTCGTCCCATCCCAATGTTCGAGAC
GGACGAATGA
Protein sequenceShow/hide protein sequence
MEYNNARAPALLAFFTALVGDVSLIPLLSNWGSKSTKFDDLLRERRSKSMLLKTLQHMSGRPPLIVYKQNTSPKAVTRVRFFTNFLNVDKDEAASRRTSRCHRFGREARK
ASRKGDKKRLSRGDSVIIMNVEEWGILLIRPIPMFETDE