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Tan0019712 (gene) of Snake gourd v1 genome

Gene IDTan0019712
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43146852..43147067
RNA-Seq ExpressionTan0019712
SyntenyTan0019712
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]1.5e-0853.62Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRG
        +SWLIC+V +SMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRG

KAE8651825.1 hypothetical protein Csa_006496, partial [Cucumis sativus]2.2e-0753.03Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINR
        +SWLICL L+ MLV GQEVAA+  YLK +D CNQP+PPP+C  PN +      AN Y RG   + +
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINR

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]2.5e-1158.57Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL+ MLV  Q+VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]9.4e-1158.57Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLIC+VL+SMLV  QEVA++  +LK  D C QPNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]2.6e-1361.43Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLIC+V +SMLV G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein1.1e-1261.43Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLICL L+ MLV GQEVAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein7.2e-0953.62Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRG
        +SWLIC+V +SMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 301.0e-0754.29Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLIC  L+SMLV G EVAA   +LK +D C QP+PP SC   +    +P+   AY RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 101.2e-1158.57Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL+ MLV  Q+VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein1.5e-0642.86Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++W+ICL+++S  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 126.5e-0738.57Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++W+I L+++  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 135.9e-0840Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++W+ICL+++   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 111.2e-0841.43Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++WLICL+++   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 105.5e-0638.81Show/hide
Query:  LICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        +ICL+++   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 253.8e-0746.48Show/hide
Query:  MKQSWLICLVLVSMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLVSMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 103.9e-0738.81Show/hide
Query:  LICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        +ICL+++   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 118.5e-1041.43Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++WLICL+++   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 124.6e-0838.57Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++W+I L+++  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 134.2e-0940Show/hide
Query:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        ++W+ICL+++   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLVSMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 252.7e-0846.48Show/hide
Query:  MKQSWLICLVLVSMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLVSMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTGTTAGCATGTTGGTGACAGGACAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTAGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAAGTTCTACACCTGTTTCTGCTAATGCCTACACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTGTTAGCATGTTGGTGACAGGACAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTAGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAAGTTCTACACCTGTTTCTGCTAATGCCTACACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLVSMLVTGQEVAADRTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSAINRCRGG