; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019716 (gene) of Snake gourd v1 genome

Gene IDTan0019716
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L26
Genome locationLG03:72762101..72763030
RNA-Seq ExpressionTan0019716
SyntenyTan0019716
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO50531.1 Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus olitorius]1.8e-6995.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]3.7e-7098.63Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]3.1e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]3.7e-7097.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_028772784.1 60S ribosomal protein L26-1-like [Prosopis alba]3.1e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGR+GKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A1R3FXG3 Ribosomal protein L26/L24P, eukaryotic/archaeal8.9e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A1R3I630 Ribosomal protein L26/L24P, eukaryotic/archaeal8.9e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1BS88 60S ribosomal protein L26-11.8e-7098.63Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1HHW6 60S ribosomal protein L26-1-like1.8e-7097.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1KU52 60S ribosomal protein L26-1-like1.8e-7097.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-12.3e-6789.73Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLS DLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

P61254 60S ribosomal protein L262.5e-4569.72Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

P61257 60S ribosomal protein L262.5e-4569.72Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.1e-6183.45Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR+NRK HF+A SS RRV MSSPLS DLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-21.7e-6586.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein1.7e-6889.73Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLS DLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein1.2e-6686.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGTAAGGCGCATTTCTCCGCGCCGTCGAGCGTTCGTCGGGTTATTATGAGTTCTCCTCTCTCGAATGA
CCTCCGGTCAAAGTACAACGTCCGATCCATGCCGATTCGGAAGGATGATGAGGTCCAAGTCGTTCGTGGAACTTACAAGGGCCGGGAGGGTAAGGTCGTGCAGGTGTACC
GTAGGAAGTGGGTCATCCACATCGAGCGCATCACTCGCGAGAAGGTTAATGGATCCACTGTCAACGTCGGCATCAACCCCTCGAAGGTCGTGATTACGAAGCTCAGGCTG
GACAAGGACCGCAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCTGACAAAGACAAAGGTACCAAGTTCACCGCAGAGGATATCATGCAGAGCGTCGATTA
A
mRNA sequenceShow/hide mRNA sequence
CCCAAAATAAATAGTATCATGTGTGTATAAAATCTTGGAAACCCTAACTTCAGTCTCGCCCTTCATTCGCCATATTCTAGCTGCTCCCCTTTCCCCTTCCCCCTTCCCCA
CCGGCAGTCAACATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGTAAGGCGCATTTCTCCGCGCCGTCGAGCGTTCGTCGGGTTATTATGAGTTCTCC
TCTCTCGAATGACCTCCGGTCAAAGTACAACGTCCGATCCATGCCGATTCGGAAGGATGATGAGGTCCAAGTCGTTCGTGGAACTTACAAGGGCCGGGAGGGTAAGGTCG
TGCAGGTGTACCGTAGGAAGTGGGTCATCCACATCGAGCGCATCACTCGCGAGAAGGTTAATGGATCCACTGTCAACGTCGGCATCAACCCCTCGAAGGTCGTGATTACG
AAGCTCAGGCTGGACAAGGACCGCAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCTGACAAAGACAAAGGTACCAAGTTCACCGCAGAGGATATCATGCA
GAGCGTCGATTAATTTTGAAAATGGTGATGTTTAAGTTGATAGAACTGTTATTTTCTTTCATAGTTATGTAGCGTGTCTTGTGTTTTAAGATAATAGGAAAATTTTCCTC
GGACATGTGGCTATAATTGTCGACTTTGGAGGTCTTGATTATGGTATTTTTAAATCACATTTTGTTATTCCAATGAGCTACTATTCCTATTTGATTATTACTGTTGCTAC
ATGTTGAATTTTTGCTTGTTTGATGGAGTTCCAATTGCTTAGTTATAGCAGATGCTTTATGAAATTGGCTATGTATGTCATTTGTCTTACAGGGTTTCTTCTTTTCCAAA
CTCCACTTTTGGCATTCAGTTTATGTAGTTTTCTGATCTGTGGGTAGGAG
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL
DKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD