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Tan0019737 (gene) of Snake gourd v1 genome

Gene IDTan0019737
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG09:65011255..65011809
RNA-Seq ExpressionTan0019737
SyntenyTan0019737
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046551.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.6e-0663.27Show/hide
Query:  HANAPPST-VPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLL
        HANAPPST +PP A A LKRIHIG   SP IF Y  AV+  A+I WD L
Subjt:  HANAPPST-VPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLL

KAG6587964.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2371.95Show/hide
Query:  MDFTTQTLATRKQHWLVYMGR--------PTSIHANAPPSTVPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLLD
        MDFTTQTLATRKQH LVYM R         TSIHANAPPS+ PPSAAAHLKR HIGR  SPVIF Y EAV+D+ VICWDL++
Subjt:  MDFTTQTLATRKQHWLVYMGR--------PTSIHANAPPSTVPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLLD

KAG7021854.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]9.0e-2373.75Show/hide
Query:  MDFTTQTLATRKQHWLVYMGR--------PTSIHANAPPSTVPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDL
        MDFTTQTLATRKQH LVYM R         TSIHANAPPS+ PPSAAAHLKR HIGR  SPVIF Y EAV+D+ VICWDL
Subjt:  MDFTTQTLATRKQHWLVYMGR--------PTSIHANAPPSTVPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDL

TrEMBL top hitse value%identityAlignment
A0A5A7TZ04 Pentatricopeptide repeat-containing protein3.7e-0663.27Show/hide
Query:  HANAPPST-VPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLL
        HANAPPST +PP A A LKRIHIG   SP IF Y  AV+  A+I WD L
Subjt:  HANAPPST-VPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCACAACACAAACTTTGGCCACTAGAAAACAACACTGGCTCGTCTACATGGGGCGACCAACTTCCATCCATGCAAATGCACCGCCGTCGACCGTTCCTCCTTC
TGCAGCTGCCCATCTGAAGAGAATCCATATTGGACGAACTTTTTCTCCAGTCATCTTCAGATATCCAGAGGCAGTGGAAGACAGTGCTGTAATATGTTGGGATTTGTTGG
ATATTGATTTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCACAACACAAACTTTGGCCACTAGAAAACAACACTGGCTCGTCTACATGGGGCGACCAACTTCCATCCATGCAAATGCACCGCCGTCGACCGTTCCTCCTTC
TGCAGCTGCCCATCTGAAGAGAATCCATATTGGACGAACTTTTTCTCCAGTCATCTTCAGATATCCAGAGGCAGTGGAAGACAGTGCTGTAATATGTTGGGATTTGTTGG
ATATTGATTTTCTTTGA
Protein sequenceShow/hide protein sequence
MDFTTQTLATRKQHWLVYMGRPTSIHANAPPSTVPPSAAAHLKRIHIGRTFSPVIFRYPEAVEDSAVICWDLLDIDFL