; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019751 (gene) of Snake gourd v1 genome

Gene IDTan0019751
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHIG1 domain-containing protein
Genome locationLG05:70515609..70516449
RNA-Seq ExpressionTan0019751
SyntenyTan0019751
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573043.1 RING-H2 finger protein ATL48, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3493.9Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S EPNLDEFFVEKKRARNPLVPVGA VTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYGENPWR S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

XP_004152465.1 RING-H2 finger protein ATL48 [Cucumis sativus]9.1e-3490.24Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S+EPNLDEFFVEKKRARNPLVP+GAL TAGVLTAGLISFR+GNSQLGQMLMRARVVVQGATVALMVG+A+YYGENPWR+S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

XP_022954948.1 RING-H2 finger protein ATL48-like [Cucurbita moschata]5.3e-3493.9Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S EPNLDEFFVEKKRARNPLVPVGA VTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYGENPWR S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

XP_023541211.1 RING-H2 finger protein ATL48-like [Cucurbita pepo subsp. pepo]9.1e-3492.68Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S EPNLDEFFVEKKRARNPLVP+GALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYG+NPWR S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

XP_038895243.1 RING-H2 finger protein ATL48-like [Benincasa hispida]1.7e-3596.34Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+SEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYGENPWR+S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

TrEMBL top hitse value%identityAlignment
A0A0A0LTF8 HIG1 domain-containing protein4.4e-3490.24Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S+EPNLDEFFVEKKRARNPLVP+GAL TAGVLTAGLISFR+GNSQLGQMLMRARVVVQGATVALMVG+A+YYGENPWR+S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

A0A1S3AVM7 RING-H2 finger protein ATL485.8e-3490.24Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S+EPNLDEFFVEKKRARNPLVP+GAL TAGVLTAGLISFR+GNSQLGQ+LMRARVVVQGATVALMVG+AFYYGENPWR+S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

A0A5A7UHA1 RING-H2 finger protein ATL485.8e-3490.24Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S+EPNLDEFFVEKKRARNPLVP+GAL TAGVLTAGLISFR+GNSQLGQ+LMRARVVVQGATVALMVG+AFYYGENPWR+S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

A0A6J1GSJ9 RING-H2 finger protein ATL48-like2.6e-3493.9Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S EPNLDEFFVEKKRARNPLVPVGA VTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYGENPWR S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

A0A6J1K3J5 RING-H2 finger protein ATL48-like7.5e-3493.9Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS
        M+S E NLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVG+AFYYGENPWR S
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS

SwissProt top hitse value%identityAlignment
Q4VC39 Putative HIG1 domain family member 2B2.0e-0743.94Show/hide
Query:  SEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMV
        S      E F+ K R  NP+VP+G L TA VLT GL  F QGNSQ  +++M  ++  QG T+A ++
Subjt:  SEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMV

Q6CBQ8 Respiratory supercomplex factor 1, mitochondrial4.4e-0744.83Show/hide
Query:  PLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENP
        PLVP+G L T G L     + R GN +    +  ARV  QG TVA ++G A YYG++P
Subjt:  PLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENP

Q7X843 RING-H2 finger protein ATL482.2e-3077.5Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWR
        M+S EP++++ F EKKR RNPLVP+GAL+TAGVLTAGLISFR+GNSQLGQ+LMRARVVVQGATVALMVG+ +YYG+NPW+
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWR

Q9BW72 HIG1 domain family member 2A, mitochondrial3.6e-0954.24Show/hide
Query:  EFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMV
        E FV K R  NP+VP+G L TA  LT GL SF +GNSQ  Q++MR R+  QG TVA ++
Subjt:  EFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMV

Q9CQJ1 HIG1 domain family member 2A4.4e-0744.29Show/hide
Query:  SEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGAT-VALMVGSA
        S      E F+ K R  NP+VP+G L TA  LT GL  F +G S   Q++MR R+  QG T VA+++G A
Subjt:  SEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGAT-VALMVGSA

Arabidopsis top hitse value%identityAlignment
AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein1.5e-3177.5Show/hide
Query:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWR
        M+S EP++++ F EKKR RNPLVP+GAL+TAGVLTAGLISFR+GNSQLGQ+LMRARVVVQGATVALMVG+ +YYG+NPW+
Subjt:  MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAGAGGAGCCCAATTTGGACGAATTCTTCGTAGAGAAGAAGCGCGCCAGGAACCCTCTGGTCCCCGTTGGTGCACTTGTCACTGCTGGAGTTCTCACGGCTGG
ATTAATCAGCTTTAGGCAAGGCAACTCTCAATTGGGGCAGATGCTAATGAGAGCTCGTGTGGTTGTCCAAGGTGCTACAGTAGCACTGATGGTTGGCTCGGCTTTCTACT
ATGGAGAGAATCCCTGGCGAACAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAGAGGAGCCCAATTTGGACGAATTCTTCGTAGAGAAGAAGCGCGCCAGGAACCCTCTGGTCCCCGTTGGTGCACTTGTCACTGCTGGAGTTCTCACGGCTGG
ATTAATCAGCTTTAGGCAAGGCAACTCTCAATTGGGGCAGATGCTAATGAGAGCTCGTGTGGTTGTCCAAGGTGCTACAGTAGCACTGATGGTTGGCTCGGCTTTCTACT
ATGGAGAGAATCCCTGGCGAACAAGTTAA
Protein sequenceShow/hide protein sequence
MNSEEPNLDEFFVEKKRARNPLVPVGALVTAGVLTAGLISFRQGNSQLGQMLMRARVVVQGATVALMVGSAFYYGENPWRTS