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Tan0019760 (gene) of Snake gourd v1 genome

Gene IDTan0019760
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive family protein
Genome locationLG06:38037296..38037598
RNA-Seq ExpressionTan0019760
SyntenyTan0019760
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592925.1 CDPK-related kinase 3, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4388.66Show/hide
Query:  GERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        GERS QGS KLGVPKG LAIKVGHQSEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +FRYVQALID+EISFH  HLHVPCFR+
Subjt:  GERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

XP_011656853.1 auxin-responsive protein SAUR32 [Cucumis sativus]7.4e-3881.19Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFH--ELHLHVPCF
        M SGERS +  S   VPKGCLAIKVGH+SEEKQRFVVPV+YFNHPLF+QLLKEAEDEYGFDQKGTITIPCHV++FRYVQALIDRE SFH    HL+VPCF
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFH--ELHLHVPCF

Query:  R
        R
Subjt:  R

XP_022959927.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]1.0e-4288Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        MVS ERSSQGS KLGVPKG LAIKVGHQSEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +FRYVQALID+EISFH  HL VPCFR+
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

XP_023005102.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]9.1e-4488Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        MVS ERSSQGS KLGVPKG LAIKVGH+SEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +FRYVQALID+EISFH  HLHVPCFR+
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

XP_023515188.1 auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]9.1e-4488Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        MVS ERSSQGS KLGVPKG LAIKVGHQSEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +F+YVQALID+EISFH  HLHVPCFR+
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

TrEMBL top hitse value%identityAlignment
A0A0A0KFM7 Uncharacterized protein3.6e-3881.19Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFH--ELHLHVPCF
        M SGERS +  S   VPKGCLAIKVGH+SEEKQRFVVPV+YFNHPLF+QLLKEAEDEYGFDQKGTITIPCHV++FRYVQALIDRE SFH    HL+VPCF
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFH--ELHLHVPCF

Query:  R
        R
Subjt:  R

A0A5A7TA19 Auxin-responsive family protein4.7e-3879.61Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF---HELHLHVPC
        M SGERS +  S   VPKGCLAIKVGH+SEEKQRFVVPV+YFNHPLF+QLLKEAEDEYGFDQKGTITIPCHV++FRYVQALIDRE SF   H  HL+VPC
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF---HELHLHVPC

Query:  FRL
        FR+
Subjt:  FRL

A0A6J1H5X7 auxin-responsive protein SAUR32-like4.8e-4388Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        MVS ERSSQGS KLGVPKG LAIKVGHQSEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +FRYVQALID+EISFH  HL VPCFR+
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

A0A6J1KS93 auxin-responsive protein SAUR32-like4.4e-4488Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL
        MVS ERSSQGS KLGVPKG LAIKVGH+SEEKQRFVVPV+YFNHPLFMQLLKEAE+EYGFDQKGTITIPCHV +FRYVQALID+EISFH  HLHVPCFR+
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL

E5GCM6 Auxin-responsive family protein4.7e-3879.61Show/hide
Query:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF---HELHLHVPC
        M SGERS +  S   VPKGCLAIKVGH+SEEKQRFVVPV+YFNHPLF+QLLKEAEDEYGFDQKGTITIPCHV++FRYVQALIDRE SF   H  HL+VPC
Subjt:  MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF---HELHLHVPC

Query:  FRL
        FR+
Subjt:  FRL

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR361.0e-1353.73Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALI
        VP+G LAI VG +  +  R +VP++YFNHPLF +LL+EAE EYGF  +G ITIPC   +F  V+  I
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALI

P32295 Indole-3-acetic acid-induced protein ARG71.0e-1040.74Show/hide
Query:  RSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQ-KGTITIPCHVQEFRYVQALIDRE
        R+   S  L  PKG LA+ VG   E  +RFV+PV + N PLF  LL +AE+E+G+D   G +TIPC    F+++ + +  +
Subjt:  RSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQ-KGTITIPCHVQEFRYVQALIDRE

Q41220 Auxin-responsive protein SAUR157.3e-1247.76Show/hide
Query:  PKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQ-KGTITIPCHVQEFRYVQALI
        P+G +A+ VG   ++K+R+VVPV Y N PLF QLL ++E+E+G+D   G +TIPCH   F  V + I
Subjt:  PKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQ-KGTITIPCHVQEFRYVQALI

Q9SGU2 Auxin-responsive protein SAUR711.8e-1042.47Show/hide
Query:  RSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYV
        R+ +   K  VP+G + + VGH   E +RFVV     NHP+F+ LLK++  EYG++Q+G + IPCHV  F  +
Subjt:  RSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYV

Q9ZUZ3 Auxin-responsive protein SAUR321.3e-3282.28Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH
        VPKGCLAIKVG Q EE+QRF+VPV+YFNHPLFMQLLKEAEDEYGFDQKGTITIPCHV+EFRYVQALID E S +  + H
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family9.1e-3482.28Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH
        VPKGCLAIKVG Q EE+QRF+VPV+YFNHPLFMQLLKEAEDEYGFDQKGTITIPCHV+EFRYVQALID E S +  + H
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH

AT3G60690.1 SAUR-like auxin-responsive protein family5.9e-1750.68Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF
        VPKG  A+ +G +  + QR +VP++YFNHPLF +LL+EAE+E+GF Q+G ITIPC   +F+ VQ  I+    F
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISF

AT3G61900.1 SAUR-like auxin-responsive protein family9.4e-3178.67Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHE
        VPKGCLAIKVG + EEKQRFVVPV YFNHPLFMQLL+EAE+EYGF+QKGTITIPCHV+ FRYVQ +I+RE S  +
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHE

AT4G00880.1 SAUR-like auxin-responsive protein family6.1e-3066.67Show/hide
Query:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREIS----------FHELHLH-VPCFRL
        VPKGCLA+KVG Q EE++RFV+PVMYFNHPLF QLLKEAE+E+GF QKGTITIPCHV+EFRYVQ LIDRE +           H  H H + CFR+
Subjt:  VPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREIS----------FHELHLH-VPCFRL

AT5G53590.1 SAUR-like auxin-responsive protein family1.8e-2158.02Show/hide
Query:  VPKGCLAIKVGHQSEEK--QRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH
        VPKGC+AI VGH+ +E+   RFVVP+++ +HPLF+ LLKEAE EYGF   G ITIPC V EF++VQ +ID E   H  H H
Subjt:  VPKGCLAIKVGHQSEEK--QRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTGGCGAGAGATCAAGCCAAGGGAGTTCAAAATTAGGGGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATCAAAGTGAAGAGAAACAGAGATTTGTAGT
GCCTGTTATGTATTTCAATCACCCTTTGTTCATGCAGCTGCTCAAAGAGGCTGAAGACGAATATGGGTTTGATCAAAAGGGAACCATCACTATTCCTTGTCATGTCCAGG
AATTTAGGTATGTCCAAGCCTTGATTGATCGAGAAATCTCCTTCCATGAACTCCATCTCCATGTTCCTTGCTTTAGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTGGCGAGAGATCAAGCCAAGGGAGTTCAAAATTAGGGGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATCAAAGTGAAGAGAAACAGAGATTTGTAGT
GCCTGTTATGTATTTCAATCACCCTTTGTTCATGCAGCTGCTCAAAGAGGCTGAAGACGAATATGGGTTTGATCAAAAGGGAACCATCACTATTCCTTGTCATGTCCAGG
AATTTAGGTATGTCCAAGCCTTGATTGATCGAGAAATCTCCTTCCATGAACTCCATCTCCATGTTCCTTGCTTTAGGCTTTGA
Protein sequenceShow/hide protein sequence
MVSGERSSQGSSKLGVPKGCLAIKVGHQSEEKQRFVVPVMYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVQEFRYVQALIDREISFHELHLHVPCFRL