; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019776 (gene) of Snake gourd v1 genome

Gene IDTan0019776
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationLG06:3959097..3961549
RNA-Seq ExpressionTan0019776
SyntenyTan0019776
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593336.1 hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4478.57Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQ++LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGLEL QRSFSITASNSS+GNS KE NDGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI LVV LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

KAG7025683.1 hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4377.78Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQ++LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGLEL QRSFSITASNSS+GNS KE NDGSK T DAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI LVV LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]7.4e-4377.78Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQL LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGL+L QRSFSITASNSS+GNS KE NDGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI L V LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]2.5e-4378.57Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQL LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGL+L QRSFSITASNSS+GNS KE NDGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI LVV LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

XP_023513743.1 uncharacterized protein LOC111778262 isoform X3 [Cucurbita pepo subsp. pepo]1.1e-4176.98Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQL LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N K L+L QRSFSITASNSS+GNS KE  DGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI LVV LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150321.0e-3773.81Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MASIFAAPPSQLNL SRR S   R +LPSIVGVK H + FP+PS R+R+ KGLEL QRSFSITASNSS+GNSIKE     +ATGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL++W+ISSA TSLIGLVV LI  K
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

A0A6J1GPL5 uncharacterized protein LOC1114559844.8e-4076.38Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLP-SIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFF
        MASIF+APPS+LNL+S RPSLIH  VLP SI G+++H N FPIPS RYRN KGLEL QRSFSITASNSS+GNSIKE N  SKA+ DAQGPP LTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLP-SIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFF

Query:  VLSLLLWIISSAVTSLIGLVVNLIATK
        V SLLLW++SSA TSLIGLVV LI+TK
Subjt:  VLSLLLWIISSAVTSLIGLVVNLIATK

A0A6J1H506 uncharacterized protein LOC1114606323.6e-4377.78Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQL LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGL+L QRSFSITASNSS+GNS KE NDGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI L V LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

A0A6J1JUC2 uncharacterized protein LOC1114884367.0e-3975.4Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLP-SIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFF
        MASIFAAPPS+LNL+S RPSLIH  VLP SI G+++H N FPIPS RYRN KGLEL  RSFSITASNSS+GNSI+E N  SKA+ DAQGPP LTILAG F
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLP-SIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFF

Query:  VLSLLLWIISSAVTSLIGLVVNLIAT
        V SLLLW++SSA TSLIGLVV LI+T
Subjt:  VLSLLLWIISSAVTSLIGLVVNLIAT

A0A6J1KVQ7 uncharacterized protein LOC1114980251.2e-4378.57Show/hide
Query:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV
        MAS+FAAPPSQL LSS RPSL H+  LPSIVGVKFH N FPIPS RY+N KGL+L QRSFSITASNSS+GNS KE NDGSK TGDAQGPP LTILAGFFV
Subjt:  MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFV

Query:  LSLLLWIISSAVTSLIGLVVNLIATK
         SL+LWI+SS+VT+LI LVV LI+TK
Subjt:  LSLLLWIISSAVTSLIGLVVNLIATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGCCGACCAAGTTTGATCCACAGAGTCGTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCC
GAACTGCTTTCCGATTCCTTCTTCCAGGTACAGGAACGCCAAAGGATTGGAATTGGGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAAATGGGAATTCCATCA
AGGAGGTAAATGATGGAAGTAAAGCAACTGGTGATGCTCAAGGTCCTCCACTTCTTACCATTTTGGCTGGTTTTTTTGTCTTGTCCCTCCTACTTTGGATAATCAGTTCT
GCTGTCACGTCACTTATAGGTCTAGTCGTCAATCTGATCGCAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
GTGTGAACTCTCTCCTCTTTGTAATAAGACTGAAGGTGAATGAATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGCCGACCAAGTTTGATCC
ACAGAGTCGTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCCGAACTGCTTTCCGATTCCTTCTTCCAGGTACAGGAACGCCAAAGGATTGGAATTGGGCCAAAGATCT
TTTTCTATAACAGCATCAAATTCCTCAAATGGGAATTCCATCAAGGAGGTAAATGATGGAAGTAAAGCAACTGGTGATGCTCAAGGTCCTCCACTTCTTACCATTTTGGC
TGGTTTTTTTGTCTTGTCCCTCCTACTTTGGATAATCAGTTCTGCTGTCACGTCACTTATAGGTCTAGTCGTCAATCTGATCGCAACAAAGTAGTATAACATTATTGGCA
TAATTTCATGTTCGCTTAGAAACTTAAATCGGTGTTCTAAAAACTCACTTTTTAGCTTTTAGCTTATTTCTAGTGAAAGTTTTTATTTTCATCTCAATTACGCTTGCGCC
TAGCTTCAGCCTTCAGCTATGTAAATAACCAAATATAGGCAGTTAGACTTGGTAATCTACAATTAAGTTAAGTAAGGTAGATTGAAAATACTTGGGTGATGCCTGAGCAA
CAACCAAGTAGTGTGCAGCTTCAATAATAACCACACAAAAAAAAATTGTAGTTTTTTTTTTTAAGAAAAAGAAAAAGAAATTGTGGTGGATAAATGTGGAGCATGAACTT
GGGTGTTGCATGACTGCCTTATAAAGCGCACCTCATATAATTATATATCTAGGTGACTCAATCTCATTTGTAGTACTAAAACATACCAGATTCTCAATATATGGACTTAT
AC
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLSSRRPSLIHRVVLPSIVGVKFHPNCFPIPSSRYRNAKGLELGQRSFSITASNSSNGNSIKEVNDGSKATGDAQGPPLLTILAGFFVLSLLLWIISS
AVTSLIGLVVNLIATK