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Tan0019801 (gene) of Snake gourd v1 genome

Gene IDTan0019801
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG03:17618044..17618466
RNA-Seq ExpressionTan0019801
SyntenyTan0019801
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.5e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
A0A5A7TU93 Gag/pol protein2.5e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
A0A5A7TWB9 Gag/pol protein2.5e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
A0A5A7V4M1 Gag/pol protein2.5e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
A0A5D3CPJ6 Gag/pol protein2.5e-4574.82Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNGAVID  SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
        Q  GE NV   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QVDGEENVFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGACAACCGTCGGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAAGAGGGATCATCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGTTGAGATGAACGGAGCGGTCATTGACGCGCAAAGTCAGGTATCGTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTCCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAGGTTGATGGAGAGGAAAATGTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGTCCTGTAGCTCATCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGACAACCGTCGGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAAGAGGGATCATCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGTTGAGATGAACGGAGCGGTCATTGACGCGCAAAGTCAGGTATCGTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTCCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAGGTTGATGGAGAGGAAAATGTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGTCCTGTAGCTCATCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAAATATGA
Protein sequenceShow/hide protein sequence
MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGAVIDAQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQVDGEENVFA
HSRRFQKGSSSGTKSCSSSSGLKKTQKKKI