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Tan0019810 (gene) of Snake gourd v1 genome

Gene IDTan0019810
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:76674328..76674953
RNA-Seq ExpressionTan0019810
SyntenyTan0019810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025575.1 hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa]1.2e-4468.75Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLELL
        MGNCIN  HFPPLQKIK F+CCE E  +L +PI  +A  AY   K  SQAFTTSS V EV    PPLPVRID   I+KP+D  KLPKATIVVSKQQLEL+
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLELL

Query:  LTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        L  SK FGSKGIAVQFSD FK D+ CP  RWHPALPT+PEV NY
Subjt:  LTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

KAE8647639.1 hypothetical protein Csa_004428 [Cucumis sativus]1.4e-4570.42Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPV--LEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLE
        MGNCIN  HFPPLQKIK F+CCE ED NLA+PIE IA+         +QAFTTSS V   EV  G PPLPVRID   I+KP+DLCKLPK TIVVSKQQLE
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPV--LEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLE

Query:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPE
        L+L  SK FGSKGIAVQFSDSFK D+ CP  RWHPALPT+PE
Subjt:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPE

KAF9851460.1 hypothetical protein H0E87_015599 [Populus deltoides]7.5e-1538.31Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAF-------TTSSPVLEVGRGSPPL--PVRIDDDHIIKPSDLCKLPKATI
        MGNCI++  +   ++ K  +    E +F  +  ++KI SG Y G  L   A         T     EV    P L  P R++    +   + C   K  I
Subjt:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAF-------TTSSPVLEVGRGSPPL--PVRIDDDHIIKPSDLCKLPKATI

Query:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        VV++QQLELLL NSKQF SKGIAV+FS+SFK  E     +W P+L T+PEV  +
Subjt:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

KAG6594706.1 hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]7.4e-3159.18Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRG--SPPLPVRI-DDDHIIKPSDLCKLPKATIVVSKQQL
        MGNCI+  H                 ++LAVP+EKIA     GLKLT       S VLEVGRG  +PP  V I DDD I KP+ LCKLPKATIVVSK+QL
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRG--SPPLPVRI-DDDHIIKPSDLCKLPKATIVVSKQQL

Query:  ELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        E LLTNS+QFGS+GIAVQFSDSFKFD  C   RW P LPT+ EVHNY
Subjt:  ELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

KAG6603830.1 hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4568.49Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHII-KPSDLCKLPK-ATIVVSKQQLE
        MGNCIN  HF PLQK+KD +CCE ED +LA+PIEKIASGAY          TTSS VLEV RG+PPLPV IDDD  + KP  LCKLPK  TIVVSKQQLE
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHII-KPSDLCKLPK-ATIVVSKQQLE

Query:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        L+L NS++F SKGIAVQFSDSF+ D+ CP  RW PALPT+ EVHNY
Subjt:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

TrEMBL top hitse value%identityAlignment
A0A0A0KHP3 Uncharacterized protein5.5e-4870.55Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPV--LEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLE
        MGNCIN  HFPPLQKIK F+CCE ED NLA+PIE IA+         +QAFTTSS V   EV  G PPLPVRID   I+KP+DLCKLPK TIVVSKQQLE
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPV--LEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLE

Query:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        L+L  SK FGSKGIAVQFSDSFK D+ CP  RWHPALPT+PEV NY
Subjt:  LLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

A0A5D3CLY8 Uncharacterized protein5.7e-4568.75Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLELL
        MGNCIN  HFPPLQKIK F+CCE E  +L +PI  +A  AY   K  SQAFTTSS V EV    PPLPVRID   I+KP+D  KLPKATIVVSKQQLEL+
Subjt:  MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLELL

Query:  LTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        L  SK FGSKGIAVQFSD FK D+ CP  RWHPALPT+PEV NY
Subjt:  LTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

A0A5N5M953 Uncharacterized protein8.9e-1439.07Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAFTTS----SPVLEVGRG---SPPL--PVRIDDDHIIKPSDLCKLPKATI
        MGNCI+       ++ K  +    E +F  + P++KI SG Y G  L ++A   +      VLE G      PPL  P R++    +   + C   K  I
Subjt:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAFTTS----SPVLEVGRG---SPPL--PVRIDDDHIIKPSDLCKLPKATI

Query:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEV
        VV++QQLELLL NSKQ   +GIAVQFS+SFK      + +W P+L T+PEV
Subjt:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEV

A0A6A1W907 Uncharacterized protein5.8e-1336.77Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPP-----LPVRIDDDHIIKPS-----DLCKLPKAT
        MGNC ++   P  +KI+  V  E E +F+   P+EKI  G Y G KL   +    SP+L   R  P      +P++    H   PS     +  K  K  
Subjt:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPP-----LPVRIDDDHIIKPS-----DLCKLPKAT

Query:  IVVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        IVV+K QLELLL ++ +F SK IA+    SF+  E   R +W P+L  +PEVH++
Subjt:  IVVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

B9HD50 Uncharacterized protein8.0e-1537.66Show/hide
Query:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQA--FTTSSPVLEVGRG-----SPPL--PVRIDDDHIIKPSDLCKLPKATI
        MGNCI++  +   ++ K  +    E +F  +  ++KI SG Y G  L   A  +    P   +  G      P L  P R++    +   + C   K  I
Subjt:  MGNCINITHFPPLQKIKDFVCCERE-DFNLAVPIEKIASGAYKGLKLTSQA--FTTSSPVLEVGRG-----SPPL--PVRIDDDHIIKPSDLCKLPKATI

Query:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY
        VV++QQLELLL NSKQF SKGIAV+FS+SFK  E     +W P+L T+PEV  +
Subjt:  VVSKQQLELLLTNSKQFGSKGIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCATCAACATAACCCATTTCCCACCACTGCAAAAGATCAAAGATTTCGTATGCTGTGAAAGAGAAGACTTCAATTTGGCAGTGCCAATTGAAAAGATCGC
TTCTGGGGCTTATAAAGGCCTAAAGCTAACAAGCCAGGCCTTTACAACTTCAAGTCCTGTGCTAGAAGTTGGGCGTGGTTCTCCTCCACTTCCTGTTCGTATTGATGATG
ATCATATTATCAAGCCTTCAGATTTGTGCAAACTCCCCAAGGCCACCATTGTTGTGAGCAAACAACAGCTTGAGTTGCTTTTGACAAACTCCAAACAGTTTGGCTCTAAA
GGTATTGCTGTTCAATTCTCTGATAGTTTCAAGTTTGACGAACCGTGCCCCAGATGGCGATGGCACCCTGCCTTGCCCACGGTTCCGGAGGTTCACAATTACTAG
mRNA sequenceShow/hide mRNA sequence
CAAGAATGGGAAATTGCATCAACATAACCCATTTCCCACCACTGCAAAAGATCAAAGATTTCGTATGCTGTGAAAGAGAAGACTTCAATTTGGCAGTGCCAATTGAAAAG
ATCGCTTCTGGGGCTTATAAAGGCCTAAAGCTAACAAGCCAGGCCTTTACAACTTCAAGTCCTGTGCTAGAAGTTGGGCGTGGTTCTCCTCCACTTCCTGTTCGTATTGA
TGATGATCATATTATCAAGCCTTCAGATTTGTGCAAACTCCCCAAGGCCACCATTGTTGTGAGCAAACAACAGCTTGAGTTGCTTTTGACAAACTCCAAACAGTTTGGCT
CTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCAAGTTTGACGAACCGTGCCCCAGATGGCGATGGCACCCTGCCTTGCCCACGGTTCCGGAGGTTCACAATTACTAG
TTTTGCTTTTTCACTTGGAAAAGTTTTGTCAAATTGATATCTGAACTTTCAAGTTTGTGCTTATTTAGCTCCAATATTTTGAGAAGTTTTTAACGGATGCGTCAAGGGTC
ATATTAAAAACTTCTTAAGCTCCGATGACTAAATACACAAAGTTGAAAATTTTGTATATATAGCTTTTTTACTGAT
Protein sequenceShow/hide protein sequence
MGNCINITHFPPLQKIKDFVCCEREDFNLAVPIEKIASGAYKGLKLTSQAFTTSSPVLEVGRGSPPLPVRIDDDHIIKPSDLCKLPKATIVVSKQQLELLLTNSKQFGSK
GIAVQFSDSFKFDEPCPRWRWHPALPTVPEVHNY