; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019927 (gene) of Snake gourd v1 genome

Gene IDTan0019927
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG02:1258255..1258752
RNA-Seq ExpressionTan0019927
SyntenyTan0019927
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061653.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa]1.2e-8090Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG      G SRS REDG RSSAASGMNLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE  ENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

KAG6589274.1 hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7586.55Show/hide
Query:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE
        MERPN G+RWANLKQRLGL KGMGCCGGSWS TSSTLTMI+GIGL     SRSHR+DG RSSAASGMNLAMALAAERNL T+EGGPT  G+VKSLMRLFE
Subjt:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE

Query:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        E+DGGDWKT+RKE SENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPIC+RSIIEILDIF
Subjt:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

KGN47968.1 hypothetical protein Csa_002927 [Cucumis sativus]5.4e-7887.65Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEG      G SRS  EDG RSSAASGMNLAMALAAERNLR DEGGPTG  DVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE SENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

XP_022953088.1 RNA-binding protein MEX3B-like [Cucurbita moschata]7.8e-8592.94Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG+     G SRSHREDGARSSA+SG+NLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE SEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

XP_023531397.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo]2.5e-7586.55Show/hide
Query:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE
        MERPN G+RWANLKQRLGL KGMGCCGGSWS TSSTLTMI+GIGL     SRSHR+DG RSSAASGMNLAMALAAERNL T+EGGPT  G+VKSLMRLFE
Subjt:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE

Query:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        E+DGGDWKT+RKE SENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPIC+RSIIEILDIF
Subjt:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

TrEMBL top hitse value%identityAlignment
A0A0A0KEL6 RING-type domain-containing protein2.6e-7887.65Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEG      G SRS  EDG RSSAASGMNLAMALAAERNLR DEGGPTG  DVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE SENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

A0A5A7V0I3 Zf-C3HC4_3 domain-containing protein5.7e-8190Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG      G SRS REDG RSSAASGMNLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE  ENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

A0A6J1EWQ9 uncharacterized protein LOC1114372264.3e-7384.8Show/hide
Query:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE
        MERPN G+RWANLKQRLGL KG+GCCGGSWS TSSTLTMI+GIGL     SRSHR+DG RSSAASGMNLAMALAAERNL T+EGGPT  G+VKSL+RLFE
Subjt:  MERPNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGIGL-----SRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE

Query:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        E+DGGDWKT+RKE SENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSREL LN GTCPIC+RSIIEILDIF
Subjt:  EMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

A0A6J1GME5 RNA-binding protein MEX3B-like3.8e-8592.94Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG+     G SRSHREDGARSSA+SG+NLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE SEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

A0A6J1HXI8 RNA-binding protein MEX3B-like3.8e-8592.94Show/hide
Query:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG+     G SRSHREDGARSSA+SG+NLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGI-----GLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MDGGDWKTKRKE SEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Subjt:  MDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

SwissProt top hitse value%identityAlignment
B3H754 E3 ubiquitin-protein ligase APD32.4e-0431.37Show/hide
Query:  MCCVCMERSKGAAFIPCGH-TFCRVCSRELWLNRGTCPICNRSIIEILDIF
        +C +C +  +   F+PCGH   C  C  ++   +G CPIC + +I +  I+
Subjt:  MCCVCMERSKGAAFIPCGH-TFCRVCSRELWLNRGTCPICNRSIIEILDIF

Q9FPH0 Putative E3 ubiquitin-protein ligase XBAT345.4e-0428.81Show/hide
Query:  KSENNGDWMCCVCMERSKGAAFIPCGHTF-CRVCSRELWLNRGTCPICNRSIIEILDIF
        K+ N  D +C +C++    A  +PCGH   C  C +E+   +  CP+C  +I +++ ++
Subjt:  KSENNGDWMCCVCMERSKGAAFIPCGHTF-CRVCSRELWLNRGTCPICNRSIIEILDIF

Arabidopsis top hitse value%identityAlignment
AT1G62370.1 RING/U-box superfamily protein1.2e-2742.62Show/hide
Query:  NGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE-GIGLSRSHREDGARS-----------------SAASGMNLAMALAAERNLRTDEGGPTG
        NGG R    W  LKQRL    +GCCG    P +  L   E  I +     E+ +++                 +  S  NLA ALA ER     E     
Subjt:  NGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE-GIGLSRSHREDGARS-----------------SAASGMNLAMALAAERNLRTDEGGPTG

Query:  AGDVKSLMRLFEEMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        A     LMRL  E DG D  T     +    D +CCVCM R KGAAFIPCGHT+CRVCSRE+W+NRGTCP+CNRSI ++LD++
Subjt:  AGDVKSLMRLFEEMDGGDWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

AT3G25030.1 RING/U-box superfamily protein1.3e-2440Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM
        W +L+++L LK  G    S +   S  T I          G  LS S       SS    + L   LA ER L   E       +V+    SLM L EE 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM

Query:  DGG------DWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        +G       D + + +  +    +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+CN +I+E+LD+F
Subjt:  DGG------DWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

AT3G25030.2 RING/U-box superfamily protein1.3e-2440Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM
        W +L+++L LK  G    S +   S  T I          G  LS S       SS    + L   LA ER L   E       +V+    SLM L EE 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM

Query:  DGG------DWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        +G       D + + +  +    +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+CN +I+E+LD+F
Subjt:  DGG------DWKTKRKEKSENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

AT4G03965.1 RING/U-box superfamily protein1.8e-3450.57Show/hide
Query:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLT------MIEGIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGA-GDVK-SLMRLFEE----
        RR   LK+RLG K +GCCG +W    ++ T        E   +S S    G  +    GMNLA ALAAERN RT+E   +G+   +K SLMRL EE    
Subjt:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLT------MIEGIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGA-GDVK-SLMRLFEE----

Query:  MDGGDWKTKRKEKSEN------NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        +   + +T+R   S +      N D +CCVCM R KGAAFIPCGHTFCRVCSRE+WLNRG+CP+CNR IIEILDI+
Subjt:  MDGGDWKTKRKEKSEN------NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

AT4G22250.1 RING/U-box superfamily protein3.1e-3147.28Show/hide
Query:  RRWANLKQRLGLKGMGCCGGSW-----------SPTS-----STLTMIEGIGLSRSHREDGARSSAASGMNLAMALAAERNLR--TDEGGPTGAGDVKSL
        RR   LK+RL  K +GCCG +W           SPTS       L +  G+ L   H        + +GMNLA AL AER  R  + E          SL
Subjt:  RRWANLKQRLGLKGMGCCGGSW-----------SPTS-----STLTMIEGIGLSRSHREDGARSSAASGMNLAMALAAERNLR--TDEGGPTGAGDVKSL

Query:  MRLFEEM-------DGGDWKTKRKEKSENNG-DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
        MRL EE        DG + +          G D +CCVCM R KGAAFIPCGHTFCRVCSRELWLNRG+CP+CNR IIEILDIF
Subjt:  MRLFEEM-------DGGDWKTKRKEKSENNG-DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGGCCGAATGGAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGATGTTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGAC
GATGATTGAAGGGATAGGCTTAAGCCGCAGCCATAGAGAAGATGGGGCTCGGAGCTCTGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGA
GAACCGACGAAGGAGGCCCCACCGGCGCCGGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAGACAAAAAGAAAGGAGAAGAGTGAG
AATAACGGTGATTGGATGTGCTGCGTGTGCATGGAGAGGAGTAAAGGTGCGGCTTTTATTCCCTGCGGACACACCTTTTGTAGGGTATGTTCTAGGGAACTATGGCTCAA
CAGAGGCACGTGTCCTATTTGCAACCGTTCGATCATTGAGATTCTTGATATTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGGCCGAATGGAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGATGTTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGAC
GATGATTGAAGGGATAGGCTTAAGCCGCAGCCATAGAGAAGATGGGGCTCGGAGCTCTGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGA
GAACCGACGAAGGAGGCCCCACCGGCGCCGGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAGACAAAAAGAAAGGAGAAGAGTGAG
AATAACGGTGATTGGATGTGCTGCGTGTGCATGGAGAGGAGTAAAGGTGCGGCTTTTATTCCCTGCGGACACACCTTTTGTAGGGTATGTTCTAGGGAACTATGGCTCAA
CAGAGGCACGTGTCCTATTTGCAACCGTTCGATCATTGAGATTCTTGATATTTTTTAG
Protein sequenceShow/hide protein sequence
MERPNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGIGLSRSHREDGARSSAASGMNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKEKSE
NNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF