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Tan0019931 (gene) of Snake gourd v1 genome

Gene IDTan0019931
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:2427435..2428170
RNA-Seq ExpressionTan0019931
SyntenyTan0019931
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600053.1 hypothetical protein SDJN03_05286, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2780.23Show/hide
Query:  MQRQMTEQNRTLVLAYLLLSLLISSQCVHSIGFVNHFE------PQLGRRFMFVDTMKGKEHVRDSSRKSPSGPNPIGNRHPPSIQ
        M RQMTEQNRTLVLAYLL  LLISSQCVHSIGFVNHFE       Q GR+FMFVDTMKG+E VR S RK+PSGPNPIGNRHPPSIQ
Subjt:  MQRQMTEQNRTLVLAYLLLSLLISSQCVHSIGFVNHFE------PQLGRRFMFVDTMKGKEHVRDSSRKSPSGPNPIGNRHPPSIQ
XP_025014776.1 uncharacterized protein LOC112536340 [Ricinus communis]2.6e-0441.98Show/hide
Query:  RTLVLAYLLLSLLISSQC-VHSIGFVNHFE--------PQLGRRF--MFVDTMKGKEHVRDSSRKSPSGPNPIGNRHPPSI
        R  ++AY L++L I+S+C  +    V H +         QLG+ F   +V + K   HV++   K+PSGPNPIGNRHPPSI
Subjt:  RTLVLAYLLLSLLISSQC-VHSIGFVNHFE--------PQLGRRF--MFVDTMKGKEHVRDSSRKSPSGPNPIGNRHPPSI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGACAAATGACAGAGCAAAACAGAACTCTAGTTCTTGCTTACCTCTTGTTGAGCCTCCTCATATCTTCCCAATGTGTTCATTCGATTGGCTTCGTGAATCATTT
TGAACCGCAATTGGGAAGAAGATTCATGTTCGTCGATACAATGAAGGGAAAAGAACATGTGAGAGATAGCAGTCGGAAGAGTCCTTCAGGGCCGAACCCTATTGGGAATC
GACACCCACCGTCAATCCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
TGTGGAGAAAAAATTTGGAAGCATGCTTTCAATTCAATGGGAATGAATATTTTTACAAGATGATTACACAGTGCACACTCAAGTCAACGAAAAACGACGCAGAAATCGAC
ATCACAGATCTGTTTTGGCATAGGATTCCCAGACACAATTTGGATCGAAATCTCAAATGCTTCAAATAAGCTATGATTATGTTGCGATTGAGATGTAACTATATTTAAGT
TCTCATGCTTATAAATCTCGGCAGAAATTGGCTTCTAATCCGCCATTGTAATGCAGAGACAAATGACAGAGCAAAACAGAACTCTAGTTCTTGCTTACCTCTTGTTGAGC
CTCCTCATATCTTCCCAATGTGTTCATTCGATTGGCTTCGTGAATCATTTTGAACCGCAATTGGGAAGAAGATTCATGTTCGTCGATACAATGAAGGGAAAAGAACATGT
GAGAGATAGCAGTCGGAAGAGTCCTTCAGGGCCGAACCCTATTGGGAATCGACACCCACCGTCAATCCAAGACTGAATCAATGGCGTATCTATCTGGAGTTCAATCAGCT
GAAAATCTGTCAAATTCTTCGTTCGTGAAGATGAAGAATGTTAAATTTTATGGAGTTTTATATATGAATTTTGGCCGTGGTGGGAAATGTTTT
Protein sequenceShow/hide protein sequence
MQRQMTEQNRTLVLAYLLLSLLISSQCVHSIGFVNHFEPQLGRRFMFVDTMKGKEHVRDSSRKSPSGPNPIGNRHPPSIQD