; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019958 (gene) of Snake gourd v1 genome

Gene IDTan0019958
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionpre-mRNA-splicing factor SPF27 homolog
Genome locationLG05:73068416..73072442
RNA-Seq ExpressionTan0019958
SyntenyTan0019958
Gene Ontology termsGO:0002758 - innate immune response-activating signal transduction (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
InterPro domainsIPR008409 - Pre-mRNA-splicing factor SPF27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584331.1 Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.7e-13494.53Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLL+HQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVACSQIEGQIQELR EA EKGWNLEVNVENGSVS PVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

XP_004137495.1 pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]6.8e-13695.7Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVAC Q+EGQIQELRREA EKGWNLEVNVENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

XP_008462680.1 PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]3.4e-13595.31Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PK KF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVAC Q+EGQIQELRREA EKGWNLEVNVENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

XP_023518986.1 pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo]8.3e-13494.14Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLL+HQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVACSQIEGQIQELR EA EKGWNLEVNVENGSVS P+S
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

XP_038893573.1 pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida]5.7e-13594.92Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MAT+N NGDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVAC Q+EGQI+ELRREA EKGWNLEVNVENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

TrEMBL top hitse value%identityAlignment
A0A0A0LQG2 Uncharacterized protein3.3e-13695.7Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVAC Q+EGQIQELRREA EKGWNLEVNVENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

A0A1S3CHH7 pre-mRNA-splicing factor SPF27 homolog1.6e-13595.31Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PK KF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVAC Q+EGQIQELRREA EKGWNLEVNVENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

A0A6J1CB04 pre-mRNA-splicing factor SPF27 homolog1.7e-13292.97Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MAT++NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS KRPADFLKDLPPVPK KF+DHP+LAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        PVPLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLLRHQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWK+LC KN+EIQVACSQIEGQIQELRREA E GWNLE N+ENGSVSLPVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

A0A6J1EDE4 pre-mRNA-splicing factor SPF27 homolog9.0e-13494.14Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLL+HQVLRLENLELMSKY PD+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVACSQIEGQIQELR EA EKGWNLEVNVENGSVS PVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

A0A6J1KLZ4 pre-mRNA-splicing factor SPF27 homolog9.9e-13393.75Show/hide
Query:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP
        MA +NN+GDILMLEAPP PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRP
Subjt:  MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRP

Query:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
        P+PLDVARYKLETPPPNKKNDETAWKQTLQ+AQCLL+HQVLRLENLELMSKYG D+WKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL
Subjt:  PVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYEL

Query:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS
        HALSTQWKELC+KN+EIQVACSQIEGQIQELR EA EKGWNLEVNVENGSVS PVS
Subjt:  HALSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

SwissProt top hitse value%identityAlignment
O75934 Pre-mRNA-splicing factor SPF271.2e-2634.95Show/hide
Query:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK
        V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  
Subjt:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK

Query:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL
        +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L  KN EI+    Q+E +I ++
Subjt:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL

Query:  RREAEE
        +++  E
Subjt:  RREAEE

Q5RKQ0 Pre-mRNA-splicing factor SPF277.0e-2735.15Show/hide
Query:  IDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKA
        +DALPY D  Y    V+     LVEEE RR   RP        P P F   +  ++  E+ER+ A +P   L + RY+L  P   +KND TAW+  +  +
Subjt:  IDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKA

Query:  QCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQELR
           L HQ +R+ENLELM++YG + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L + W  L  KN EI+ A  Q+E ++ +++
Subjt:  QCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQELR

Query:  RE
        ++
Subjt:  RE

Q6PBE2 Pre-mRNA-splicing factor SPF275.4e-2734.91Show/hide
Query:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK
        V+DALPY D  Y    V+     LVEEE RR   RP        P P +   +  ++  E+ER+ + +P   L + RY+L  P   ++ND TAW++ +  
Subjt:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK

Query:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL
        +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L  KN EI+ A  Q+E ++ +L
Subjt:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL

Query:  RREAEEKGWNLE
        +  + E   N+E
Subjt:  RREAEEKGWNLE

Q949S9 Pre-mRNA-splicing factor SPF27 homolog4.2e-8865.04Show/hide
Query:  SNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVP
        + NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK+PADFLKDLPP+PKF F + P+L +EYERVRAG+PPV 
Subjt:  SNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVP

Query:  LDV-ARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHA
        +D  +RYKLE PP NK+ND+ AWKQ LQK Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEKVNRERK+HQQ  +YEL+A
Subjt:  LDV-ARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHA

Query:  LSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVEN
        LS +W++LC KN+EIQ AC+ +E QI   ++EA E+GWNLE  +EN
Subjt:  LSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVEN

Q9D287 Pre-mRNA-splicing factor SPF271.2e-2634.95Show/hide
Query:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK
        V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  
Subjt:  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQK

Query:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL
        +   L HQ +R+ENLELMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L  KN EI+    Q+E +I ++
Subjt:  AQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVACSQIEGQIQEL

Query:  RREAEE
        +++  E
Subjt:  RREAEE

Arabidopsis top hitse value%identityAlignment
AT3G18165.1 modifier of snc1,43.0e-8965.04Show/hide
Query:  SNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVP
        + NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK+PADFLKDLPP+PKF F + P+L +EYERVRAG+PPV 
Subjt:  SNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVP

Query:  LDV-ARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHA
        +D  +RYKLE PP NK+ND+ AWKQ LQK Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEKVNRERK+HQQ  +YEL+A
Subjt:  LDV-ARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHA

Query:  LSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVEN
        LS +W++LC KN+EIQ AC+ +E QI   ++EA E+GWNLE  +EN
Subjt:  LSTQWKELCQKNIEIQVACSQIEGQIQELRREAEEKGWNLEVNVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTAGCAACAACAACGGGGATATCCTTATGCTCGAAGCCCCACCGCAGCCATCTCAACCAGCGTGGCGTGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCC
CTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTCCAAGAGACCCGCCGACTTTCTCAAAGACT
TGCCTCCTGTTCCTAAATTCAAATTTGATGATCATCCAATGCTTGCTAGAGAGTATGAACGCGTAAGAGCTGGGAGGCCTCCAGTGCCTCTCGATGTCGCAAGATATAAA
TTAGAGACACCGCCTCCAAATAAAAAGAACGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGCTGGAAAATTTGGA
ACTGATGTCAAAATATGGACCCGATGTCTGGAAGCAACACAACAAACAGTTGGAAGCACTTTTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAA
AAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGAACTTTGCCAGAAAAATATAGAAATCCAAGTGGCA
TGCTCTCAAATAGAGGGTCAAATCCAGGAGCTAAGGAGAGAGGCAGAAGAAAAAGGGTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCAGTGTCATA
A
mRNA sequenceShow/hide mRNA sequence
GAAGGAAAAAGAAACGGAGAAAACCCAATTATCTTGCGAAGCGTTCTGCACCAACTCCATCTTCTCGCACTTGAGTTTCTGTAAATCTAAACTCAAAACCTCAGTTGCTC
GTGGTGGTGGTCACTATGGCGACTAGCAACAACAACGGGGATATCCTTATGCTCGAAGCCCCACCGCAGCCATCTCAACCAGCGTGGCGTGTTTCTGCAGATGCGGAGGT
AATCGACGCCTTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTCCAAGAGACCCGCCG
ACTTTCTCAAAGACTTGCCTCCTGTTCCTAAATTCAAATTTGATGATCATCCAATGCTTGCTAGAGAGTATGAACGCGTAAGAGCTGGGAGGCCTCCAGTGCCTCTCGAT
GTCGCAAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAACGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTACGTCATCAAGTGCTGAG
GCTGGAAAATTTGGAACTGATGTCAAAATATGGACCCGATGTCTGGAAGCAACACAACAAACAGTTGGAAGCACTTTTATCAAGAATGCAAAAATTAGCTCAAGAACAGA
ATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACGCAATGGAAGGAACTTTGCCAGAAAAATATA
GAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAGCTAAGGAGAGAGGCAGAAGAAAAAGGGTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTC
GCTTCCAGTGTCATAAGGGGAGCATCCTAACCATGGTTTTTGCTGCTCAAAACTAAAGACTGCCAACGTCTTTGTTGCTGTTATCATATGCCTTCATGGAAGATGAGTTA
GTTTTCTGCTCATAGGGACAAGGTTGGTTGCTCTTTTTTGGCCGACAAAGTTTGTCTTCTGTCGTTTTCAAAATTTATATTGAATTGATTGTATCTGTACCTTTAGTCAA
GTAATTCGAAATACAGCTACTTCTGCAATGCTAACCACGTTATTGGGTCA
Protein sequenceShow/hide protein sequence
MATSNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYK
LETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNIEIQVA
CSQIEGQIQELRREAEEKGWNLEVNVENGSVSLPVS