| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004137370.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucumis sativus] | 8.0e-120 | 97.4 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDC+AKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRRAEE HQSAMPNGTTTENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_008457301.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis melo] | 4.7e-120 | 97.84 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRRAEEAHQSAMPNGTTTENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_022154903.1 U2 small nuclear ribonucleoprotein B'' 2-like [Momordica charantia] | 1.4e-119 | 96.97 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIY+KNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAK+KSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAERKRRAE++HQSAMPNGTTTENG SNATFRHANPSAPEA PNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_022949507.1 U2 small nuclear ribonucleoprotein B'' 2-like [Cucurbita moschata] | 2.3e-119 | 97.4 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAERKRR EE HQSAMPNG T ENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_023525708.1 U2 small nuclear ribonucleoprotein B'' 2-like isoform X1 [Cucurbita pepo subsp. pepo] | 5.2e-119 | 96.97 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAERKRR +E HQSAMPNG T ENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LPT7 Uncharacterized protein | 3.9e-120 | 97.4 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDC+AKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRRAEE HQSAMPNGTTTENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A1S3C564 U2 small nuclear ribonucleoprotein B'' 2-like | 2.3e-120 | 97.84 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRRAEEAHQSAMPNGTTTENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A5D3BF51 U2 small nuclear ribonucleoprotein B'' 2-like | 2.3e-120 | 97.84 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRRAEEAHQSAMPNGTTTENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A6J1DLJ9 U2 small nuclear ribonucleoprotein B'' 2-like | 6.6e-120 | 96.97 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIY+KNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAK+KSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAERKRRAE++HQSAMPNGTTTENG SNATFRHANPSAPEA PNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A6J1KA04 U2 small nuclear ribonucleoprotein B'' 2-like | 1.1e-119 | 97.4 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNL+EKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAERKRR EE HQSAMPNG T ENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A2Y0J7 U1 small nuclear ribonucleoprotein A | 5.9e-65 | 57.69 | Show/hide |
Query: PPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREK
PPN TIYI NL+EK+K EELK+SL A+FSQ+G+ILDV+A KT + +GQAWV F +V +A+ A++ MQ+FPF++KPMRIQYAKTKSD +AKADG+FVPRE+
Subjt: PPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREK
Query: KKKQEEKAERKRRAEEAHQ-SAMPNGTTTENGGSNATFRHANPSA-------PE-ATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAF
+K+ +EK E+K++ E+ H S + G G A P A PE PNNILF++NLPHET+ MMLQ+LF QYPGF+EVRM+EAKPGIAF
Subjt: KKKQEEKAERKRRAEEAHQ-SAMPNGTTTENGGSNATFRHANPSA-------PE-ATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAF
Query: VEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
VE+ D+ Q++ AM LQGFKI + M IS+AKK
Subjt: VEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| B8AM21 U2 small nuclear ribonucleoprotein B'' | 4.2e-87 | 74.25 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQT+Y++NL+EKVKKEELKRSLYAL SQYGRILDVVALKTP+LRGQAWV FSE+TAA+NA R +Q F FY K MR+QYAKTKSDC+A DGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEK-AERKRRAEEAHQSAMPNGTTTENG-GSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
P+EK+KKQEEK AE+KRRAEEA QS PN NG G A+ P A PNNILFI+NLP ET+SMMLQ+LFQQYPGFREVRMIEAKPGIAFV
Subjt: FVPREKKKKQEEK-AERKRRAEEAHQSAMPNGTTTENG-GSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
Query: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
E+EDD QS +AMQALQGFKI P +PMAIS+AKK
Subjt: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| O22922 U2 small nuclear ribonucleoprotein B'' | 2.9e-88 | 71.49 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYI+NL+E++KKEELKRSLY LFSQ+GRILDVVALKTP+LRGQAWV FSEVTAA +AVRQMQNFPFYDKPMR+QYAK KSDC+AKA+G+
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSA---MPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
FVP++KK+KQEEK ERKR + +A NG + NG +F+ PS E PNNILFI+NLPHET+SMMLQ+LF+QYPGF+E+RMI+AKPGIA
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSA---MPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
Query: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
FVE+EDDVQ+S+AMQ LQGFKI PQ+PM ISFAKK
Subjt: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Q10MR0 U2 small nuclear ribonucleoprotein B'' | 9.3e-87 | 73.82 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQT+Y++NL+EKVKKEELKRSLYAL SQYGRILDVVALKTP+LRGQAWV FSE+TAA+NA R +Q F FY K MR+QYAKT+SDC+A DGS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEK-AERKRRAEEAHQSAMPNGTTTENG-GSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
P+EK+KKQEEK AE+KRRAEEA QS PN NG G A+ P A PNNILFI+NLP ET+SMMLQ+LFQQYPGFREVRMIEAKPGIAFV
Subjt: FVPREKKKKQEEK-AERKRRAEEAHQSAMPNGTTTENG-GSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
Query: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
E+EDD QS +AMQALQGFKI P +PMAIS+AKK
Subjt: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Q8H1S6 U2 small nuclear ribonucleoprotein B'' 2 | 4.6e-94 | 76.72 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK+++EK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFYDKPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
FVP+EKK KQEEK ERKR AEE Q +MPNG TT+NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
Query: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06960.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.3e-95 | 76.72 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK+++EK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFYDKPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
FVP+EKK KQEEK ERKR AEE Q +MPNG TT+NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
Query: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT1G06960.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.1e-94 | 76.19 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK+++EK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFYDKPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVP+EKK KQEEK ERKR AEE Q +MPNG TT+NG + P PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE+
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT1G06960.3 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.1e-77 | 76.14 | Show/hide |
Query: QYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTE
++GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFYDKPMRIQYAK+KSD V KA+GSFVP+EKK KQEEK ERKR AEE Q +MPNG TT+
Subjt: QYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAERKRRAEEAHQSAMPNGTTTE
Query: NGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: NGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT2G30260.1 U2 small nuclear ribonucleoprotein B | 2.1e-89 | 71.49 | Show/hide |
Query: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYI+NL+E++KKEELKRSLY LFSQ+GRILDVVALKTP+LRGQAWV FSEVTAA +AVRQMQNFPFYDKPMR+QYAK KSDC+AKA+G+
Subjt: MLSGDIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAERKRRAEEAHQSA---MPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
FVP++KK+KQEEK ERKR + +A NG + NG +F+ PS E PNNILFI+NLPHET+SMMLQ+LF+QYPGF+E+RMI+AKPGIA
Subjt: FVPREKKKKQEEKAERKRRAEEAHQSA---MPNGTTTENGGSNATFRHANPSAPEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
Query: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
FVE+EDDVQ+S+AMQ LQGFKI PQ+PM ISFAKK
Subjt: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT2G47580.1 spliceosomal protein U1A | 5.5e-66 | 56.56 | Show/hide |
Query: DIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPR
++ PNQTIYI NL+EKVK +ELK+SL A+FSQ+G+IL+++A KT + +GQAWV F +AS A+ +M NFPFYDK MRIQYAKTKSD VAKADG+FVPR
Subjt: DIPPNQTIYIKNLDEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPR
Query: EKKKKQEEKAERKRRAEEAHQS-----------------AMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVR
EK+K+ EEK K++ ++ H S A P GG P AP A PNNILF++NLPHET+ M+LQ+LF QY GF+EVR
Subjt: EKKKKQEEKAERKRRAEEAHQS-----------------AMPNGTTTENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVR
Query: MIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
MIEAKPGIAFVEF D++QS++AMQ LQGFKI Q+ M I++AKK
Subjt: MIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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