CuGenDBv2

Gene ID	Tan0019987
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG04:59249522..59250508
RNA-Seq Expression	Tan0019987
Synteny	Tan0019987
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADJ18449.1 gag/pol protein, partial [Bryonia dioica]

1.1e-121

72.64

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFIAQ QEQ+VC               W  RFD AI SYGF+QNV+EPCVYKKIVN+ VAFLIL VDDILLIG +V  LTD+K+WL +Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQIVRNRKN+TLAMS+ASYI+K+LSRYKMQNSKKG LPFRHG+HLSK+QCPKTP+EVEDMR IPY+SA+ S+MY MLCTR +ICY+VGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPG DHW AVK IL       N  L+    +LILTGYTD DFQ+DKD+RKSTSGS F LN GAVVWRS KQ CIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNM+LPITL
Subjt:  KMMLDLEVVPNMNLPITL

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]

5.3e-124

73.27

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK +L       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]

8.5e-122

72.33

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GE QY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK IL       D +L     +LILTGYT+ DFQTDKDSRKSTS S F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWL+
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

5.3e-124

73.27

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK +L       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]

2.2e-122

72.64

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI Q QEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG + G LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW  VK IL       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2V9 Gag/pol protein

4.1e-122

72.33

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GE QY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK IL       D +L     +LILTGYT+ DFQTDKDSRKSTS S F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWL+
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

A0A5A7TZD0 Gag/pol protein

2.6e-124

73.27

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK +L       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

A0A5A7UYE8 Gag/pol protein

2.6e-124

73.27

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW AVK +L       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

A0A5A7V1F5 Gag/pol protein

1.1e-122

72.64

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFI Q QEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI    VAFL+L VDDILLIG + G LTD+K WLA+Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQI+R+RKN+TLA+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+MY MLCTR +ICYAVGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPGLDHW  VK IL       D +L     +LILTGYTD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNMNLPITL
Subjt:  KMMLDLEVVPNMNLPITL

E2GK51 Gag/pol protein (Fragment)

5.4e-122

72.64

Show/hide

Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP+GFIAQ QEQ+VC               W  RFD AI SYGF+QNV+EPCVYKKIVN+ VAFLIL VDDILLIG +V  LTD+K+WL +Q+QMKDL
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
        GEAQY L IQIVRNRKN+TLAMS+ASYI+K+LSRYKMQNSKKG LPFRHG+HLSK+QCPKTP+EVEDMR IPY+SA+ S+MY MLCTR +ICY+VGIV+R
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR
        YQSNPG DHW AVK IL       N  L+    +LILTGYTD DFQ+DKD+RKSTSGS F LN GAVVWRS KQ CIADSTMEAEYVAACEAAKEAVWLR
Subjt:  YQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR

Query:  KMMLDLEVVPNMNLPITL
        K + DLEVVPNM+LPITL
Subjt:  KMMLDLEVVPNMNLPITL

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

4.8e-27

27.53

Show/hide

Query:  CWLRRFDEAINSYGFDQNVNEPCVY---KKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYI
        CW   F++A+    F  +  + C+Y   K  +N  + +++L VDD+++   ++  + + K +L  +++M DL E ++ + I+I    +   + +S+++Y+
Subjt:  CWLRRFDEAINSYGFDQNVNEPCVY---KKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYI

Query:  NKMLSRYKMQNSKKGLLPFRHGVH---LSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAI---LNGDLI
         K+LS++ M+N      P    ++   L+ D+   T          P  S I  +MY+MLCTR ++  AV I++RY S    + W  +K +   L G + 
Subjt:  NKMLSRYKMQNSKKGLLPFRHGVH---LSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAI---LNGDLI

Query:  LNLI----------LTGYTDYDFQTDKDSRKSTSGSAF-ILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV
        + LI          + GY D D+   +  RKST+G  F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+ ++  + +
Subjt:  LNLI----------LTGYTDYDFQTDKDSRKSTSGSAF-ILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV

P0CV72 Secreted RxLR effector protein 161

1.2e-20

41.35

Show/hide

Query:  MRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILNGDLILNLI-----------LTGYTDYDFQTDKDSRKSTSGSAFILNAGA
        M+ +PY SA+ ++MY+M+ TR ++  AVG+++++ S+P   HW A+K +L                    L GY+D D+  D +SR+STSG  F LN G 
Subjt:  MRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILNGDLILNLI-----------LTGYTDYDFQTDKDSRKSTSGSAFILNAGA

Query:  VVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL
        V WRS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.1e-59

40.39

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Query:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVY-KKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKD
        M+QP+GF   G++  VC               W  +FD  + S  + +  ++PCVY K+   N    L+L VDD+L++G + GL+  +K  L+  + MKD
Subjt:  MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVY-KKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKD

Query:  LGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVT
        LG AQ  L ++IVR R +R L +S+  YI ++L R+ M+N+K    P    + LSK  CP T  E  +M ++PY+SA+ S+MY M+CTR +I +AVG+V+
Subjt:  LGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVT

Query:  RYQSNPGLDHWAAVKAIL------NGDLIL----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL
        R+  NPG +HW AVK IL       GD +     + IL GYTD D   D D+RKS++G  F  + GA+ W+S  Q C+A ST EAEY+AA E  KE +WL
Subjt:  RYQSNPGLDHWAAVKAIL------NGDLIL----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL

Query:  RKMMLDL
        ++ + +L
Subjt:  RKMMLDL

P92519 Uncharacterized mitochondrial protein AtMg00810

4.4e-12

29.24

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Query:  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPR
        +L+L VDDILL G    LL  +   L+S + MKDLG   Y L IQI  +     L +S+  Y  ++L+   M + K     LP +    +S  + P    
Subjt:  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPR

Query:  EVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTDYDFQTDKDSRKSTSGSAFIL
        +  D R     S + ++ Y+ L TR +I YAV IV +    P L  +  +K +L    G +   L +          + D D+     +R+ST+G    L
Subjt:  EVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTDYDFQTDKDSRKSTSGSAFIL

Query:  NAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW
            + W + +Q  ++ S+ E EY A    A E  W
Subjt:  NAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

8.2e-19

27.51

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Query:  MDQPKGFIAQGQEQRVCWLRR------------FDEAIN---SYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL
        M QP GFI + +   VC LR+            + E  N   + GF  +V++  ++      ++ ++++ VDDIL+ G +  LL +  + L+ ++ +KD 
Subjt:  MDQPKGFIAQGQEQRVCWLRR------------FDEAIN---SYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDL

Query:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR
         E  Y L I+    R    L +S+  YI  +L+R  M  +K    P      LS     K     E      Y   + S+ Y+   TR +I YAV  +++
Subjt:  GEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTR

Query:  YQSNPGLDHWAAVKAIL-------NGDLIL----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL
        +   P  +H  A+K IL       N  + L     L L  Y+D D+  DKD   ST+G    L    + W S KQ  +  S+ EAEY +    + E  W+
Subjt:  YQSNPGLDHWAAVKAIL-------NGDLIL----NLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL

Query:  RKMMLDLEV
          ++ +L +
Subjt:  RKMMLDLEV

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

1.7e-19

26.35

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Query:  WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKML
        W  +F   +  +GF Q+ ++   + KI       +++ VDDI++       + ++K  L S ++++DLG  +Y L ++I R+     +   K  Y   +L
Subjt:  WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKML

Query:  SRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILN---GDLILNLI---
            +   K   +P    V  S      +  +  D +   Y   I  +MY+ + TR +I +AV  ++++   P L H  AV  IL+   G +   L    
Subjt:  SRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILN---GDLILNLI---

Query:  -----LTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV
             L  ++D  FQ+ KD+R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E +WL +   +L++
Subjt:  -----LTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV

ATMG00810.1 DNA/RNA polymerases superfamily protein

3.1e-13

29.24

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Query:  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPR
        +L+L VDDILL G    LL  +   L+S + MKDLG   Y L IQI  +     L +S+  Y  ++L+   M + K     LP +    +S  + P    
Subjt:  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPR

Query:  EVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTDYDFQTDKDSRKSTSGSAFIL
        +  D R     S + ++ Y+ L TR +I YAV IV +    P L  +  +K +L    G +   L +          + D D+     +R+ST+G    L
Subjt:  EVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTDYDFQTDKDSRKSTSGSAFIL

Query:  NAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW
            + W + +Q  ++ S+ E EY A    A E  W
Subjt:  NAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW

Sequences

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CDS sequence

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ATGGACCAACCCAAGGGGTTCATTGCCCAAGGCCAAGAGCAAAGAGTTTGCTGGCTTCGAAGGTTTGATGAGGCGATCAATTCTTATGGCTTTGATCAAAATGTTAACGA
GCCTTGTGTCTACAAGAAAATCGTTAACAACACTGTCGCATTTCTAATATTGTGTGTGGATGATATCCTTCTCATTGGGATTGAGGTAGGACTTCTTACTGACATTAAGG
AATGGTTGGCTTCGCAATACCAAATGAAAGATTTGGGAGAGGCACAGTATACTCTAAGTATCCAGATAGTCCGAAACCGGAAGAATAGAACGCTAGCCATGTCTAAGGCG
TCTTATATTAACAAGATGTTGTCTAGATATAAGATGCAGAACTCCAAGAAGGGTTTGCTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGATCAATGTCCTAAGACACC
TCGAGAGGTTGAGGATATGAGACGAATCCCCTATGCTTCAGCTATAAGGAGCATGATGTATGTCATGTTGTGTACTAGGCACAACATCTGTTATGCAGTTGGGATTGTCA
CTAGGTATCAATCCAATCCAGGATTAGATCACTGGGCAGCCGTAAAGGCAATCCTCAATGGGGATTTGATCCTTAATTTGATCCTTACGGGATACACAGATTATGACTTT
CAGACCGATAAGGATTCTAGGAAATCCACTTCGGGGTCAGCCTTCATTCTAAATGCAGGAGCTGTAGTGTGGCGAAGCTTCAAGCAGGGATGTATCGCTGATTCCACGAT
GGAAGCCGAATATGTTGCGGCTTGTGAAGCTGCAAAGGAAGCTGTTTGGCTTAGGAAGATGATGCTAGATTTGGAAGTTGTTCCAAATATGAACTTGCCAATCACGTTGG
TGACAACAGTGGTGCAGTAG

mRNA sequence

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Protein sequence

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MDQPKGFIAQGQEQRVCWLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKA
SYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILNGDLILNLILTGYTDYDF
QTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEVVPNMNLPITLVTTVVQ

Tan0019987 (gene) of Snake gourd v1 genome