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Tan0020014 (gene) of Snake gourd v1 genome

Gene IDTan0020014
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationLG01:116320474..116321599
RNA-Seq ExpressionTan0020014
SyntenyTan0020014
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES89457.2 hypothetical protein MTR_4g075160 [Medicago truncatula]4.4e-1475.81Show/hide
Query:  MGGG-GHG-AGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSI---RLQLQ
        MGGG GHG  GTTYKG+TIHQPKRWHTVTGKGLCAVMW G I GR  V M  SI   RLQLQ
Subjt:  MGGG-GHG-AGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSI---RLQLQ
OWM81193.1 hypothetical protein CDL15_Pgr007224 [Punica granatum]3.4e-1471.43Show/hide
Query:  MGGG-GHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRA-TVTMGMSIRL
        MGGG GHG GTTYKG T+HQPKRWH VTGKGLCA+MWVGDI GRA  + M M + +
Subjt:  MGGG-GHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRA-TVTMGMSIRL
PON60580.1 hypothetical protein PanWU01x14_151920 [Parasponia andersonii]1.1e-1577.19Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-SIRLQLQV
        GGGHG GTTYKG+T+H PKRWH VTGKGLCA+MWVGDI GRA VTMGM SIR   +V
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-SIRLQLQV
RYR21292.1 hypothetical protein Ahy_B03g066583 isoform B [Arachis hypogaea]4.0e-1574.55Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQ
        GGGHG GTTYKGITIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M +   L+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQ
RYR21293.1 hypothetical protein Ahy_B03g066583 isoform A [Arachis hypogaea]5.2e-1573.21Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQV
        GGGHG GTTYKGITIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M +  + Q+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQV
TrEMBL top hitse value%identityAlignment
A0A218X8E0 Uncharacterized protein1.6e-1471.43Show/hide
Query:  MGGG-GHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRA-TVTMGMSIRL
        MGGG GHG GTTYKG T+HQPKRWH VTGKGLCA+MWVGDI GRA  + M M + +
Subjt:  MGGG-GHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRA-TVTMGMSIRL
A0A2P5CHP8 Uncharacterized protein5.1e-1677.19Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-SIRLQLQV
        GGGHG GTTYKG+T+H PKRWH VTGKGLCA+MWVGDI GRA VTMGM SIR   +V
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-SIRLQLQV
A0A445A4B5 Uncharacterized protein2.5e-1573.21Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQV
        GGGHG GTTYKGITIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M +  + Q+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQV
A0A445A4L0 Uncharacterized protein1.9e-1574.55Show/hide
Query:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQ
        GGGHG GTTYKGITIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M +   L+
Subjt:  GGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQ
G7JPJ0 Uncharacterized protein2.1e-1475.81Show/hide
Query:  MGGG-GHG-AGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSI---RLQLQ
        MGGG GHG  GTTYKG+TIHQPKRWHTVTGKGLCAVMW G I GR  V M  SI   RLQLQ
Subjt:  MGGG-GHG-AGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSI---RLQLQ
SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 25.1e-1383.33Show/hide
Query:  MGGGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMW
        MGGGGHG G TYKG+T+H PK WHTVTGKGLCAVMW
Subjt:  MGGGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMW
Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein3.6e-1483.33Show/hide
Query:  MGGGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMW
        MGGGGHG G TYKG+T+H PK WHTVTGKGLCAVMW
Subjt:  MGGGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGTGGACACGGAGCTGGGACAACTTATAAGGGCATCACCATTCACCAGCCAAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTTATGTGGGT
TGGAGACATCCATGGGAGGGCCACGGTGACCATGGGAATGAGCATTAGGCTTCAGTTGCAGGTTCCCTATTTGAATGTTACGAGTACCATATTTGCTAAGTTTTGTTCAA
ATAAGGATATTGTGATAGCCAAGTGGACAGAAACATCACTTCATCATTTTACTTTTGTAATCATGAATTCTTCTGATATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTGGTGGACACGGAGCTGGGACAACTTATAAGGGCATCACCATTCACCAGCCAAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTTATGTGGGT
TGGAGACATCCATGGGAGGGCCACGGTGACCATGGGAATGAGCATTAGGCTTCAGTTGCAGGTTCCCTATTTGAATGTTACGAGTACCATATTTGCTAAGTTTTGTTCAA
ATAAGGATATTGTGATAGCCAAGTGGACAGAAACATCACTTCATCATTTTACTTTTGTAATCATGAATTCTTCTGATATGTTTTGA
Protein sequenceShow/hide protein sequence
MGGGGHGAGTTYKGITIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMSIRLQLQVPYLNVTSTIFAKFCSNKDIVIAKWTETSLHHFTFVIMNSSDMF