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Tan0020034 (gene) of Snake gourd v1 genome

Gene IDTan0020034
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
Genome locationLG02:85535153..85535963
RNA-Seq ExpressionTan0020034
SyntenyTan0020034
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.2e-2566.28Show/hide
Query:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        MS    +++LSRE+IK+IFREHDIDGDG L +SEMVKAFG  G ++P YKAHYGMA AD +GDG I+E+EL+KLVDYAEKFQ++++
Subjt:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]8.7e-2767.44Show/hide
Query:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        MS    R++LSRE+IK+IFREHDIDGDG L M+EMVKAFGC G ++P YKAHYGMA AD +GDG I+E+EL+KLVDYA+KFQ++++
Subjt:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]1.1e-2465.06Show/hide
Query:  GPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        G  +   SREE+K+IFREHDIDGDG L +SE++KA G LG+ IP YKAHYGMA+ D +GDG+I EDEL+KL+DYAE+FQ R+R
Subjt:  GPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]4.3e-2670Show/hide
Query:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        R++LSRE+IK+IFREHDIDGDG L M+EMVKAFGC G ++P YKAHYGMA AD +GDG I+E+EL+KLVDYA+KFQ++++
Subjt:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]1.5e-2369.62Show/hide
Query:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRK
        +IK SR +IK+IF EHDIDGDG L +SE++KAF  LG +IPLYKAHYG+AFAD DGDG+I E+EL+KLVDYAEK  +RK
Subjt:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRK
TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein5.1e-2565.06Show/hide
Query:  GPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        G  +   SREE+K+IFREHDIDGDG L +SE++KA G LG+ IP YKAHYGMA+ D +GDG+I EDEL+KL+DYAE+FQ R+R
Subjt:  GPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
A0A0A0LRC1 Uncharacterized protein4.2e-2767.44Show/hide
Query:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        MS    R++LSRE+IK+IFREHDIDGDG L M+EMVKAFGC G ++P YKAHYGMA AD +GDG I+E+EL+KLVDYA+KFQ++++
Subjt:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
A0A5A7UYC0 Putative calcium-binding protein CML106.0e-2666.28Show/hide
Query:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        MS    +++LSRE+IK+IFREHDIDGDG L +SEMVKAFG  G ++P YKAHYGMA AD +GDG I+E+EL+KLVDYAEKFQ++++
Subjt:  MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
A0A6J1CSH1 probable calcium-binding protein CML157.4e-2469.62Show/hide
Query:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRK
        +IK SR +IK+IF EHDIDGDG L +SE++KAF  LG +IPLYKAHYG+AFAD DGDG+I E+EL+KLVDYAEK  +RK
Subjt:  RIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRK
A0A6J1KUW2 calmodulin-like1.6e-2368.35Show/hide
Query:  IKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        +KLSR +IK+IF EHDIDGDG L +SE+ KAF   G +IPLYKAHYG+A+ADADGDG+I E+ELEKLVDYAE+   +KR
Subjt:  IKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
SwissProt top hitse value%identityAlignment
Q6Z2J1 Probable calcium-binding protein CML204.8e-0436.11Show/hide
Query:  IKLSRE---EIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVD
        + L RE   E+  +FR  D DGDGL+  +EM + +GC      + +A   +A AD DGDG +  +EL  +++
Subjt:  IKLSRE---EIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVD
Q8RYJ9 Putative calcium-binding protein CML231.3e-0438.36Show/hide
Query:  LSREEIKDIFREHDIDGDGLLCMSEM---VKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAE
        ++ +E + +F   D DGDG +  +E+   VKA   LG  +P  +    MA AD DGDG++DE+E  +LV   E
Subjt:  LSREEIKDIFREHDIDGDGLLCMSEM---VKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAE
Q8RZB5 Probable calcium-binding protein CML104.3e-0538.36Show/hide
Query:  SSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKL
        S G        EE++ +FR+ D +GDG +  SE+   F  LG+     +    MA ADADGDG I  DE   L
Subjt:  SSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKL
Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein2.9e-0429.41Show/hide
Query:  SREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYA
        + E++  +FR  D DG+G +  +E+  +   LG+ + + +    +  AD+DGDG I+  E  K ++ A
Subjt:  SREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYA
AT1G76640.1 Calcium-binding EF-hand family protein8.4e-0427.4Show/hide
Query:  EIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
        +++ +F   D + DG +   E+ K+F  LG  +   +A   +  +D DGDGM+D +E   L+   ++F   ++
Subjt:  EIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR
AT3G51920.1 calmodulin 97.6e-0533.33Show/hide
Query:  EEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLV
        +E+ ++FR  D DGDGL+   E+ +    +G  I   +A + +  AD DGDG +   E  K++
Subjt:  EEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTGGCCCAGGCAGGATAAAATTGTCCAGAGAGGAGATCAAGGATATCTTCAGAGAGCACGACATCGATGGAGATGGTCTATTGTGCATGAGCGAGATGGTGAA
GGCCTTTGGGTGCCTTGGTTATCTCATTCCTTTGTACAAAGCACACTACGGAATGGCTTTTGCTGATGCTGATGGCGATGGCATGATCGACGAGGACGAGCTCGAAAAGC
TTGTCGACTATGCCGAGAAGTTTCAGAACAGGAAGCGCTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGTTCTACTATAAATATCCCACAACCTTACATTGATCGCCAAGCAAAAGAAAAAAAAAACAAAGAAACAAACATTTTGGAAGACACTAAAATCAGATCAATTCTGA
AAAAATGTCTTCTGGCCCAGGCAGGATAAAATTGTCCAGAGAGGAGATCAAGGATATCTTCAGAGAGCACGACATCGATGGAGATGGTCTATTGTGCATGAGCGAGATGG
TGAAGGCCTTTGGGTGCCTTGGTTATCTCATTCCTTTGTACAAAGCACACTACGGAATGGCTTTTGCTGATGCTGATGGCGATGGCATGATCGACGAGGACGAGCTCGAA
AAGCTTGTCGACTATGCCGAGAAGTTTCAGAACAGGAAGCGCTGAGGCTATATGTAATTTCCTCTGTTCACTTATAATGACATTCGTTTCATGCACCAGTTTACTTTCAA
GTTTGGAGTTTTAGTGTTCTGTATAAAATAAAAAGAGAAGGAGGGCAAGCTAGCTAGCTACTCAGTCCTGCTTTGATTTGGCTATTAAATGGGAATTAGTGCTTCAATGA
TCGAATTGTATGATGTGTTTATTTTGTGTGTCAACCATCAAACTGCCATTTATGGGGTTAATAAGGCAATAGTGCGCCTTTCCAAGTAAATTAATTTACACGTCTCAACA
TTTTACCACCTAAATAACGGTAAGATATTATCGTAGTGTTTATTGCATTAGATCTTAATCTTTATTGCATTAGATTAGATTTTATTTTATTTTATTTTATATTGTCCTAT
AAATAGGACATTTAGCCTTGTATCTCAATATAACAATCAAC
Protein sequenceShow/hide protein sequence
MSSGPGRIKLSREEIKDIFREHDIDGDGLLCMSEMVKAFGCLGYLIPLYKAHYGMAFADADGDGMIDEDELEKLVDYAEKFQNRKR