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Tan0020050 (gene) of Snake gourd v1 genome

Gene IDTan0020050
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:45628769..45629430
RNA-Seq ExpressionTan0020050
SyntenyTan0020050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64824.1 hypothetical protein Csa_022834 [Cucumis sativus]3.2e-1565.43Show/hide
Query:  MRRLVLGVILLLVLISSAEITKGTTRLSLRRLTVEHEQRLPR-NENETAKTRRPNDSGEYNHHVCPRRDVDCWSNRKQIRD
        MRRL L  IL+LVLI+S  + +GTT  S RRL   ++QR    NENE AKTRRPNDSGEYNHH C RRDVDCWSN KQ  D
Subjt:  MRRLVLGVILLLVLISSAEITKGTTRLSLRRLTVEHEQRLPR-NENETAKTRRPNDSGEYNHHVCPRRDVDCWSNRKQIRD
TrEMBL top hitse value%identityAlignment
A0A0A0LV16 Uncharacterized protein1.5e-1565.43Show/hide
Query:  MRRLVLGVILLLVLISSAEITKGTTRLSLRRLTVEHEQRLPR-NENETAKTRRPNDSGEYNHHVCPRRDVDCWSNRKQIRD
        MRRL L  IL+LVLI+S  + +GTT  S RRL   ++QR    NENE AKTRRPNDSGEYNHH C RRDVDCWSN KQ  D
Subjt:  MRRLVLGVILLLVLISSAEITKGTTRLSLRRLTVEHEQRLPR-NENETAKTRRPNDSGEYNHHVCPRRDVDCWSNRKQIRD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGACTAGTGCTTGGTGTAATCCTCCTGTTGGTGCTGATCAGCTCGGCCGAGATAACCAAAGGGACAACGCGTTTGAGCCTCCGACGACTGACCGTTGAACACGA
GCAACGACTGCCGAGGAATGAGAATGAAACTGCCAAAACTAGGCGCCCTAATGACAGTGGTGAATACAATCACCATGTGTGTCCTAGAAGAGATGTGGATTGCTGGAGTA
ACAGAAAGCAAATTAGGGACTAA
mRNA sequenceShow/hide mRNA sequence
CAACCATTTCCACTAATACTTCAATTTTCACGTCTCAATAACAACAGAAAAGTAACTTCTATAACTTAGCCTTTTTCTTCCTCACTTCATTTCTCTCTTTCCATTGATTC
AGCCCTATTTCTTCGTAGAGATTTAGAAAGCTACTATCTCAATAGAACAATCTTTGTGTGAAAAATGAGAAGACTAGTGCTTGGTGTAATCCTCCTGTTGGTGCTGATCA
GCTCGGCCGAGATAACCAAAGGGACAACGCGTTTGAGCCTCCGACGACTGACCGTTGAACACGAGCAACGACTGCCGAGGAATGAGAATGAAACTGCCAAAACTAGGCGC
CCTAATGACAGTGGTGAATACAATCACCATGTGTGTCCTAGAAGAGATGTGGATTGCTGGAGTAACAGAAAGCAAATTAGGGACTAATATGGATATCAAATAATTAAGTT
TGCTGGCTAGATGAGATTTGTGTATGTAAATAAATAAATCATCTGTCCACTTGACAAGCTAGCGATGATTATGTGTTTTCTACTGTTTTTTTAAATATGATGTAGGCATT
AGCAAGAAGTCCTTGTTTGATTAGTAATATGAATATATAAGAGTTTTATGCAAAACTAATTTTGGAAGTATTGTTTTGTATAATGTGACCGTTAGATTAAAATTGTTTCA
AA
Protein sequenceShow/hide protein sequence
MRRLVLGVILLLVLISSAEITKGTTRLSLRRLTVEHEQRLPRNENETAKTRRPNDSGEYNHHVCPRRDVDCWSNRKQIRD