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Tan0020052 (gene) of Snake gourd v1 genome

Gene IDTan0020052
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:6954801..6955672
RNA-Seq ExpressionTan0020052
SyntenyTan0020052
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570883.1 hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3168.06Show/hide
Query:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSG-ARGKKVVRFKLQ-EDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQ
        MGN C ++N+VMAQDE      NSPP EAKK       GSAMAKPKTAE RSG A GKKVVRFKLQ EDENSGG    G G   GVLRIKVV+SQ+ELKQ
Subjt:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSG-ARGKKVVRFKLQ-EDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQ

Query:  ILKDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG
        ILK+ EN+S +LEELIAE KVKGRT+  VSD  TD  EVEDENG
Subjt:  ILKDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG

KGN63254.1 hypothetical protein Csa_022493 [Cucumis sativus]5.7e-2560.47Show/hide
Query:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL
        MGN C ++N+VMAQD+ Y   P     E KK       GSAMAKPK   G  GA GKKVVRF LQE+E    G   G  +G GVLRIKVV+SQKELKQIL
Subjt:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGRTSTIVSD
        K RENNSC+LEELI ELKVKGR +T+ +D
Subjt:  KDRENNSCTLEELIAELKVKGRTSTIVSD

TYK24218.1 hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]5.7e-2559.84Show/hide
Query:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF-------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQI
        MGN C R N+VMAQD+ Y   P     EA+K        GSAMAKPK   G  GA GKKVVRF LQE+E        G  +G GVLRIKVV+SQKELK+I
Subjt:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF-------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQI

Query:  LKDRENNSCTLEELIAELKVKGRTSTI
        LK+RENNSC+LEELI ELKVKGR +T+
Subjt:  LKDRENNSCTLEELIAELKVKGRTSTI

XP_022140639.1 uncharacterized protein LOC111011249 [Momordica charantia]3.4e-3366.2Show/hide
Query:  MGNCLRNNRVMAQDEVYSPSPNSPPTEAK-------KFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL
        MGNCLRNNRVMAQDE  SPSPNS  TE           GSA+A+PKT E R  AR KKVVRF+ +EDE SGG        GGGVLRIKVVVSQKELKQIL
Subjt:  MGNCLRNNRVMAQDEVYSPSPNSPPTEAK-------KFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG
        KDRE+NS TLEEL+AELK+KGRT   +SD R D    EDENG
Subjt:  KDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG

XP_038902397.1 uncharacterized protein LOC120089037 [Benincasa hispida]2.2e-3265.47Show/hide
Query:  NCLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQILKDR
        NC ++N+VMAQDE   P    PP EAKK       GSAMAKPKTAE R+G   KKVVRFKLQE+E    G+       GGVLRIKVV+SQKELKQ+LKDR
Subjt:  NCLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQILKDR

Query:  ENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG
        ENNSCTLEELI ELKVKGRT+  +SDGR D   VEDENG
Subjt:  ENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG

TrEMBL top hitse value%identityAlignment
A0A0A0LQE9 Uncharacterized protein2.8e-2560.47Show/hide
Query:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL
        MGN C ++N+VMAQD+ Y   P     E KK       GSAMAKPK   G  GA GKKVVRF LQE+E    G   G  +G GVLRIKVV+SQKELKQIL
Subjt:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGRTSTIVSD
        K RENNSC+LEELI ELKVKGR +T+ +D
Subjt:  KDRENNSCTLEELIAELKVKGRTSTIVSD

A0A540LQ93 Uncharacterized protein1.8e-0838.46Show/hide
Query:  MGNCLR-NNRVMAQD-EVYSPSPNSPPTEAKKFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGA-GGGVLRIKVVVSQKELKQILK-DR
        MGNCLR NN++ +QD E +  +  + P EA+K  +AM  P   +     + KK VRF LQED  + G  V G  +  GG +RI++VV+Q+ELKQ+L   +
Subjt:  MGNCLR-NNRVMAQD-EVYSPSPNSPPTEAKKFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGA-GGGVLRIKVVVSQKELKQILK-DR

Query:  ENNSCTLEELIAELKVKGRTSTIVSDGRTD
        ++N  +LEEL+  +K +G   + ++   +D
Subjt:  ENNSCTLEELIAELKVKGRTSTIVSDGRTD

A0A5D3DKZ8 Uncharacterized protein2.8e-2559.84Show/hide
Query:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF-------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQI
        MGN C R N+VMAQD+ Y   P     EA+K        GSAMAKPK   G  GA GKKVVRF LQE+E        G  +G GVLRIKVV+SQKELK+I
Subjt:  MGN-CLRNNRVMAQDEVYSPSPNSPPTEAKKF-------GSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQI

Query:  LKDRENNSCTLEELIAELKVKGRTSTI
        LK+RENNSC+LEELI ELKVKGR +T+
Subjt:  LKDRENNSCTLEELIAELKVKGRTSTI

A0A6J1CG85 uncharacterized protein LOC1110112491.6e-3366.2Show/hide
Query:  MGNCLRNNRVMAQDEVYSPSPNSPPTEAK-------KFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL
        MGNCLRNNRVMAQDE  SPSPNS  TE           GSA+A+PKT E R  AR KKVVRF+ +EDE SGG        GGGVLRIKVVVSQKELKQIL
Subjt:  MGNCLRNNRVMAQDEVYSPSPNSPPTEAK-------KFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG
        KDRE+NS TLEEL+AELK+KGRT   +SD R D    EDENG
Subjt:  KDRENNSCTLEELIAELKVKGRTSTIVSDGRTDVVEVEDENG

M5WRA3 Uncharacterized protein3.7e-0943.22Show/hide
Query:  MGNCLR--NNRVMAQDEVYSPSPNSPPTEAKKFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVI-GAGAGGGVLRIKVVVSQKELKQILK-DR
        MGNCLR  NN+V AQD        +P  EAKK  + M  P   + +     +K VRF LQEDE+SGGG V+ G     GV+RI++VV+Q+ELKQ+L   +
Subjt:  MGNCLR--NNRVMAQDEVYSPSPNSPPTEAKKFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVI-GAGAGGGVLRIKVVVSQKELKQILK-DR

Query:  ENNSCTLEELIAELKVKG
        ++N  +LE+L++ ++ +G
Subjt:  ENNSCTLEELIAELKVKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGTTTGAGGAACAACAGAGTGATGGCGCAAGATGAGGTTTATTCGCCTTCGCCTAATTCCCCTCCGACGGAAGCTAAGAAGTTCGGATCGGCGATGGCGAA
GCCGAAGACGGCAGAGGGGAGAAGCGGTGCGCGAGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAGGATGAGAATTCCGGCGGAGGAGAAGTGATCGGCGCCGGAGCCG
GAGGAGGAGTATTGAGGATTAAAGTGGTGGTGTCTCAAAAAGAGTTGAAGCAGATTTTGAAGGATAGAGAGAACAATTCCTGTACCTTGGAGGAATTGATAGCTGAATTG
AAGGTGAAAGGCAGGACGAGTACGATTGTTTCAGATGGTAGAACCGATGTAGTTGAAGTTGAGGATGAAAATGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
GCGCAAGAAACGCTCTCTCATGTGCCTTATACGCTACGGCTACACCCCTTTCTCTCTCTCTCTATAAAATCCCTTGCCTCCATTTTTCACTTCTCTAAATTCTTCTTTCC
ATTTCGCAAAATTACGAAGAAACAGATTCACTGAATTCATCCGAACTGCCATGGGAAATTGTTTGAGGAACAACAGAGTGATGGCGCAAGATGAGGTTTATTCGCCTTCG
CCTAATTCCCCTCCGACGGAAGCTAAGAAGTTCGGATCGGCGATGGCGAAGCCGAAGACGGCAGAGGGGAGAAGCGGTGCGCGAGGTAAGAAGGTAGTGAGGTTTAAGCT
ACAAGAGGATGAGAATTCCGGCGGAGGAGAAGTGATCGGCGCCGGAGCCGGAGGAGGAGTATTGAGGATTAAAGTGGTGGTGTCTCAAAAAGAGTTGAAGCAGATTTTGA
AGGATAGAGAGAACAATTCCTGTACCTTGGAGGAATTGATAGCTGAATTGAAGGTGAAAGGCAGGACGAGTACGATTGTTTCAGATGGTAGAACCGATGTAGTTGAAGTT
GAGGATGAAAATGGAATTTGAAGATCTCCATTAAAGTCTTGTCTCTCGATCTTTATCTATACATATTAACAATCTGAAAATATTACTGCGGTGTGTTATTCAATCACCAA
AACTGTTATATCTGTGCGTGGTTCGAAGATTGAGTAGTATTTTTGAAGTTAGTGTGTTCGATTCTGTTCGAATTATATTTGAACAACTATATGATGTATATTAAGCATGG
TATTAAATTTCCATCATATGTCCATGGGTTTGACATCGACACTAGGGATGAATCGACATTTCCATTATATCGTACAAAATTGATGAAATATTAAAGAAAATT
Protein sequenceShow/hide protein sequence
MGNCLRNNRVMAQDEVYSPSPNSPPTEAKKFGSAMAKPKTAEGRSGARGKKVVRFKLQEDENSGGGEVIGAGAGGGVLRIKVVVSQKELKQILKDRENNSCTLEELIAEL
KVKGRTSTIVSDGRTDVVEVEDENGI