CuGenDBv2

Gene ID	Tan0020076
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial-like
Genome location	LG01:14623227..14625992
RNA-Seq Expression	Tan0020076
Synteny	Tan0020076
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011650608.1 cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus]

3.3e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRN  QP RGFASSAHDDA ETAKWEKITYAGI TCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

XP_022929363.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

2.5e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMATIRSNLLRAAFRGASRN AQP RGFASSAHDDA ETAKWEKITYAGI +CSILAFYNLSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

XP_022941809.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

4.3e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMATIRSNLLRAAFRGASRN AQP RGFASSAHDDA ETAKWEKITYAGIA C+ LAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

XP_022984430.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]

1.5e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMA IRSNLLRAAFRGASRNPAQP RGFASSAHDDA ETAKWEKITYAGI +CSILAFYNLSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

XP_038905594.1 cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]

2.5e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSNLLRAA RGASRN AQP RGFASSAHDDA ETAKWEKITYAGIATC+ILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BPM0 cytochrome c oxidase subunit 6a, mitochondrial

1.0e-45

90.82

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSN LRAA RGASRN  QP RGFASSAHDDA ETAKWEKITYAGI TCSILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

1.2e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMATIRSNLLRAAFRGASRN AQP RGFASSAHDDA ETAKWEKITYAGI +CSILAFYNLSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

A0A6J1FPI8 cytochrome c oxidase subunit 6a, mitochondrial-like

2.1e-46

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMATIRSNLLRAAFRGASRN AQP RGFASSAHDDA ETAKWEKITYAGIA C+ LAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

A0A6J1J8L1 cytochrome c oxidase subunit 6a, mitochondrial-like

7.1e-47

92.86

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMA IRSNLLRAAFRGASRNPAQP RGFASSAHDDA ETAKWEKITYAGI +CSILAFYNLSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

1.0e-45

91.84

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MAMATIRSNLLRAA RGASRN AQP RGFASSAHDDA ETAKWEKITYAGIA C+ LAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

1.2e-32

68.69

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A +    P R F+SSA HDDA+E AKWEKITY GIA+C+ LA Y LSKGH H E+PPAYP+MHIRNKEFPWGPDGLFEVKH+
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

8.9e-34

68.69

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A +    P R F+SSA HDDA+E AKWEKITY GIA+C+ LA Y LSKGH H E+PPAYP+MHIRNKEFPWGPDGLFEVKH+
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

AT4G37830.2 cytochrome c oxidase-related

2.6e-25

59.6

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Query:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH
        MA A +RS L RA  R A +    P R F+SSA HDDA+E AKWEKITY GIA+C+ LA Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Subjt:  MAMATIRSNLLRAAFRGASRNPAQPNRGFASSA-HDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

Sequences

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CDS sequence

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ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACCCTGCTCAGCCTAACCGCGGCTTCGCGTCCTCTGCTCACGACGATGC
TCATGAAACGGCAAAGTGGGAGAAGATTACTTATGCAGGCATTGCAACCTGCTCTATCTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTG
CATATCCATATATGCACATCCGTAATAAAGAGTTCCCATGGGGGCCCGATGGTCTCTTCGAGGTGAAGCATCACTGA

mRNA sequence

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ATTTTTGTGAGAGAGTTGTCAATGTAAATTGCAAGGGTTTGGTCATTTCAAGCAACTCGGCAGTTTGGGAGAGGGAGAGACAAAAGAGAAAATGGCAATGGCGACGATCC
GATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACCCTGCTCAGCCTAACCGCGGCTTCGCGTCCTCTGCTCACGACGATGCTCATGAAACGGCAAAGTGG
GAGAAGATTACTTATGCAGGCATTGCAACCTGCTCTATCTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTGCATATCCATATATGCACAT
CCGTAATAAAGAGTTCCCATGGGGGCCCGATGGTCTCTTCGAGGTGAAGCATCACTGAGGACTATTTTTGGTTCAAGGGGACATCGAGCATGTTAATTCTACTTCTCATT
TTGTTTCATATCAAAAAGACTTCATCGACTGGTTGGGTTGGATTTTTCTTTCCAAGGGATGCATGGCCATTTTGCATTTGTTAAATGCTATCAAGGTCTTATGTGAATTG
TGGTTTAATTTTTTGTGTTGTCAAAACTATCCTTCCTGATTAAATAAGATTAACTCTCCACCATTCTAAAGCTCAGTTTGCATACTAACCTGTTTTTTTTTTTTTTTTTT
TTTTT

Protein sequence

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MAMATIRSNLLRAAFRGASRNPAQPNRGFASSAHDDAHETAKWEKITYAGIATCSILAFYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH

Tan0020076 (gene) of Snake gourd v1 genome