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Tan0020078 (gene) of Snake gourd v1 genome

Gene IDTan0020078
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein 230
Genome locationLG11:3759538..3763269
RNA-Seq ExpressionTan0020078
SyntenyTan0020078
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]3.8e-5492.24Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR + YSSLA+DDND+D +GS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]1.7e-5493.1Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]9.2e-5694.83Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]2.7e-5594.83Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]3.1e-5695.69Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A1S3C9X7 Transmembrane protein 2301.9e-5492.24Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR + YSSLA+DDND+D +GS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2308.4e-5593.1Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2304.4e-5694.83Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 2301.3e-5594.83Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1K312 Transmembrane protein 2308.4e-5593.1Show/hide
Query:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR V YSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2309.0e-1441.59Show/hide
Query:  KVHYSSL-ATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR
        KV YS L +TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +
Subjt:  KVHYSSL-ATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR

Query:  GANGYRFASIPDY
        G  GY +  IPD+
Subjt:  GANGYRFASIPDY

Q5R8X3 Transmembrane protein 2309.0e-1441.96Show/hide
Query:  KVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        KV YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  KVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q5ZLH4 Transmembrane protein 2302.4e-1441.59Show/hide
Query:  KVHYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR
        KV YS LA TDD  +D    +  P          KIP+K+IALA+ L ++G+ L+ +   +L G+++ G   +A  +L +G L FLPGFY  RIAYYA +
Subjt:  KVHYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR

Query:  GANGYRFASIPDY
        G  GY +  IPD+
Subjt:  GANGYRFASIPDY

Q8CIB6 Transmembrane protein 2304.0e-1442.48Show/hide
Query:  KVHYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR
        KV YS LA TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +
Subjt:  KVHYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWR

Query:  GANGYRFASIPDY
        G  GY +  IPD+
Subjt:  GANGYRFASIPDY

Q96A57 Transmembrane protein 2305.3e-1441.96Show/hide
Query:  KVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        KV YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  KVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)8.7e-1243.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)3.4e-4064.46Show/hide
Query:  MASRRKVHYSSLATDDNDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET
        MASRR V Y+ L  D++D  Y     +   +DPRF Y+PKAFD++PWKSIALA+FLL LG LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRKVHYSSLATDDNDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGANGYRFASIPDY
        RIAYY+WRGA GYRFA+IP Y
Subjt:  RIAYYAWRGANGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.5e-1143.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTAGACGGAAGGTTCATTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTATGATGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTT
TGACAAAATTCCATGGAAATCCATTGCTCTGGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCATATGGCAGGAGAGA
AATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTTCCAGGCTTTTACGAGACTAGGATTGCTTATTATGCATGGAGGGGTGCTAATGGATATCGATTT
GCTTCCATTCCCGATTATTAG
mRNA sequenceShow/hide mRNA sequence
GAAAACCCAGAACCGTCGAATCAAAGACACGATGGATTTTCTCAACAGCCTCCGTTGAAATTTGAAGACTCCATTCTTGATATTCGCTATCATGGCATCTAGACGGAAGG
TTCATTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTATGATGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAAATTCCATGGAAA
TCCATTGCTCTGGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCATATGGCAGGAGAGAAATCACAAGCTTATGGTCT
TTTAGCATTGGGGTTTCTTACCTTCCTTCCAGGCTTTTACGAGACTAGGATTGCTTATTATGCATGGAGGGGTGCTAATGGATATCGATTTGCTTCCATTCCCGATTATT
AGGTGTTCCTATCTCGATAGTGTATGCTTGTCTCATCGCTCTTTCAATGTAAAACTATCATATAAAGTCAGAAAATGGTTTGTACAGAATCATGTCTCTTGTTTTTGTAA
TGTATTAATCTTTTATTCTCATTTATAGCTTGTTAGAAAAACGATAAATTATGTAGCTGTAGTTTATTAACTTGACAAGTCTTGTAGCTAAAATTCATAAACTTTATGCC
CATGCAAACACTTCGAGTGAGATTATTACATGACAAACTGCGTGGAGCAAGGTTGTTTATCTAGGATTTGAACTTTTTCTGGATTACATTGTGCAGAAGACAACATTAAG
ACCAGGTCTAGGTTGTTTCATACCGAAGCACTAGATGAATCTTTAGTTGCAGTTGATGCTTTTGTG
Protein sequenceShow/hide protein sequence
MASRRKVHYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRF
ASIPDY