; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020081 (gene) of Snake gourd v1 genome

Gene IDTan0020081
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L31
Genome locationLG01:115343001..115343832
RNA-Seq ExpressionTan0020081
SyntenyTan0020081
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591302.1 50S ribosomal protein L31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6695.49Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPI P VAPPK K+FGARS RAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022936208.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]3.5e-6796.24Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPI P VAPPK K+FGARSHRAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022940973.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]3.8e-6693.98Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP  PA+APPKNK+ GAR +RAVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022975559.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]4.5e-6795.49Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPI P VAPPK K+FGARSHRAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_023535198.1 50S ribosomal protein L31, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-6695.49Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MAL+LTNSFLQRPI P VAPPK K+FGARSHRAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

TrEMBL top hitse value%identityAlignment
A0A6J1C3Q3 50S ribosomal protein L31, chloroplastic4.3e-6393.89Show/hide
Query:  LNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF
        LNLTNSFLQR I PAVAP K K+FGARSHR VVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKF
Subjt:  LNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF

Query:  GELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        GELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  GELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FCM8 50S ribosomal protein L311.7e-6796.24Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPI P VAPPK K+FGARSHRAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FQS6 50S ribosomal protein L311.9e-6693.98Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP  PA+APPKNK+ GAR +RAVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1IKY2 50S ribosomal protein L312.2e-6795.49Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPI P VAPPK K+FGARSHRAVVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1J0F9 50S ribosomal protein L31, chloroplastic7.8e-6592.48Show/hide
Query:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQR   PA+APPKNK+ GAR +R VVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic2.1e-4366.67Show/hide
Query:  MALNLTNSFLQR-PIFP-AVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        M L L+N FL + P  P  +  PK     + + R   +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKF
Subjt:  MALNLTNSFLQR-PIFP-AVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        RKK+GEL+Q+MEIPVLKGEI+LP K+KS  K KKK
Subjt:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Q31L35 50S ribosomal protein L313.4e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L313.4e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L313.4e-1758.46Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic5.4e-4763.89Show/hide
Query:  MALNLTNSFLQ-----------RPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ           +P+  AV   K     + +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQ-----------RPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L313.9e-4863.89Show/hide
Query:  MALNLTNSFLQ-----------RPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ           +P+  AV   K     + +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQ-----------RPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCAATTTTTCCGGCTGTCGCACCGCCGAAGAACAAGGATTTTGGAGCAAGAAGTCACCGGGCAGTGGTGACCTG
CCGGAAAAAGGATCTGCACCCCCAATTCTACGAGGATGCTAAGGTTTATTGCAATGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGT
GGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAACTGTCGCAATTGATGGAG
ATTCCTGTCCTCAAAGGTGAAATCGTTCTGCCCACAAAACGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
TGAAGAAGAACTCATTTTCCAATCTTTCTTCCTCCCACTTATCCTCTCTTCATCGCACTCAAACTGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCA
ATTTTTCCGGCTGTCGCACCGCCGAAGAACAAGGATTTTGGAGCAAGAAGTCACCGGGCAGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTCTACGAGGATGC
TAAGGTTTATTGCAATGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCG
CCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAACTGTCGCAATTGATGGAGATTCCTGTCCTCAAAGGTGAAATCGTTCTGCCCACAAAA
CGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAGAAGACCGTGAATAGTTCAATTGGCCTGGTAATCAGTTAAATTCAAATGCGTATCACGGTTTTTGGGTTTTTCTTTTA
TATTGCATATGTATGTAATTTAGCACTATCGAAACTTGTCTGAATCGAACAATTTGTTTCTGTTGGTTGCATTGCACTGCCTCACTGTTTCTGTATGTTGAATATTGATG
AAGAGTTTGATGGGTCTGCTGTAGAATTATTCCTCGTTTGTTCGATTTTCTAAAATTTATTAGAAAGAAAAATTTTGGACGTTTTA
Protein sequenceShow/hide protein sequence
MALNLTNSFLQRPIFPAVAPPKNKDFGARSHRAVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME
IPVLKGEIVLPTKRKSGGKGKKK