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Tan0020112 (gene) of Snake gourd v1 genome

Gene IDTan0020112
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:52575328..52575658
RNA-Seq ExpressionTan0020112
SyntenyTan0020112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]1.5e-3275.53Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        M  NNRQKK+HSSFSIF+F KSR+G+KGD+ +H GS  DE+  + KVWPSDED+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQTITI+PNG
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

KAG6592311.1 hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3170.97Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        M  NNR KK+HSSFSIFNF K RKG+K DHYDHGG  +E+  + KVWPSDED+ + WVAEPGIDRKAKDYID+IYRNR+FE+ERQT+T+  NG
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]8.8e-3374.47Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        M  NNRQKK H+SFSIF+F KSR+G+KGDH +H GS  DE+  + KVWPSDED+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+TI+PNG
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]8.0e-3476.67Show/hide
Query:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGS-GDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        NRQKK+HSSFSIF+F KS++G+KGDHYDHGG+  DE+  ++KVWPSDED+ +HW+AEPGIDRKAKDYIDRIYRNRVFE+ERQT+TI+PNG
Subjt:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGS-GDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]1.6e-3474.47Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNGP
        M  ++RQKKTHSSFSIF+F KS++G+KGD Y+HG + ++V ++SKVWPSDED+GY WVAEPGIDRKAKDYIDRIY+NRVFETERQT+TI+PNGP
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNGP

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein3.9e-3476.67Show/hide
Query:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGS-GDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        NRQKK+HSSFSIF+F KS++G+KGDHYDHGG+  DE+  ++KVWPSDED+ +HW+AEPGIDRKAKDYIDRIYRNRVFE+ERQT+TI+PNG
Subjt:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGS-GDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

A0A0A0K8W0 Uncharacterized protein7.8e-3574.47Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNGP
        M  ++RQKKTHSSFSIF+F KS++G+KGD Y+HG + ++V ++SKVWPSDED+GY WVAEPGIDRKAKDYIDRIY+NRVFETERQT+TI+PNGP
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNGP

A0A0A0KAK6 Uncharacterized protein4.3e-3374.47Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        M  NNRQKK H+SFSIF+F KSR+G+KGDH +H GS  DE+  + KVWPSDED+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+TI+PNG
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

A0A0A0KBW1 Uncharacterized protein1.3e-3478.89Show/hide
Query:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        NRQKK+HSSFSIF+F KSR+G+KGDHYDHGG+  DE+  ++KVWPSDED+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQT+TI+PNG
Subjt:  NRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

A0A5A7SWT9 Uncharacterized protein7.3e-3375.53Show/hide
Query:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG
        M  NNRQKK+HSSFSIF+F KSR+G+KGD+ +H GS  DE+  + KVWPSDED+ +HWVAEPGIDRKAKDYIDRIYRNRVFE+ERQTITI+PNG
Subjt:  MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSG-DEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein9.2e-1245.24Show/hide
Query:  QKKTHSS--FSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTIT
        + ++HSS  FS+F+F K+R+  +    +  GS D+   T K   SDED+ Y WVAEPGIDRKA  +I + +  RV E+ERQT++
Subjt:  QKKTHSS--FSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTIT

AT5G26620.1 unknown protein3.8e-1057.69Show/hide
Query:  SGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTI
        S D+V  T K W SDED+ Y WVAEPGIDRKA  +I + + +RV E+ERQT+
Subjt:  SGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCCAACAACAGGCAAAAGAAGACTCACTCTTCTTTCTCAATCTTTAACTTCTTAAAATCAAGAAAGGGTAAGAAAGGAGATCATTATGATCATGGCGGCTCTGG
GGACGAGGTGTCAACTACGAGTAAGGTGTGGCCAAGCGATGAGGACAGAGGCTACCACTGGGTTGCCGAGCCTGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGA
TCTATAGAAATCGTGTCTTTGAAACCGAGCGACAAACAATCACTATTAATCCTAATGGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCAATTCATTTCCCCCTCTAATTCCTTCTCTTCTCTTCTCCCTCATGAGTGCCAACAACAGGCAAAAGAAGACTCACTCTTCTTTCTCAATCTTTAACTTCTTAAAAT
CAAGAAAGGGTAAGAAAGGAGATCATTATGATCATGGCGGCTCTGGGGACGAGGTGTCAACTACGAGTAAGGTGTGGCCAAGCGATGAGGACAGAGGCTACCACTGGGTT
GCCGAGCCTGGTATTGATAGAAAGGCCAAAGATTACATCGACAGGATCTATAGAAATCGTGTCTTTGAAACCGAGCGACAAACAATCACTATTAATCCTAATGGTCCTTA
A
Protein sequenceShow/hide protein sequence
MSANNRQKKTHSSFSIFNFLKSRKGKKGDHYDHGGSGDEVSTTSKVWPSDEDRGYHWVAEPGIDRKAKDYIDRIYRNRVFETERQTITINPNGP