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Tan0020134 (gene) of Snake gourd v1 genome

Gene IDTan0020134
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationLG01:25233358..25236185
RNA-Seq ExpressionTan0020134
SyntenyTan0020134
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577696.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3378.33Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG
        MQSAMEKLSNMGSVAK KLKICRAKLDEKV+KAS KT E +KIA+ER+KAAEAEAKRELHEAKARHAAQKL +R+SHVL    HHQPP VEGG+A     
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG

Query:  ANVPAYPIASHD-YYPGHKI
        ANVPAYPIAS + YYPGH+I
Subjt:  ANVPAYPIASHD-YYPGHKI
XP_004148757.1 late embryogenesis abundant protein 6 [Cucumis sativus]1.8e-3580.17Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVL---HHHQPPVVEGGAATHLGG
        MQSAMEKLSNMGSVAK KLKICRAKLDEKVEKAS KT E +KI +ER+KAA AEAKRELHEAKARHAAQKL +RKSHVL    HHQ P +EGGAATHLGG
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVL---HHHQPPVVEGGAATHLGG

Query:  A-NVPAYPIASHD-YYPGHKI
        A NVPAYPI S + Y+PGHKI
Subjt:  A-NVPAYPIASHD-YYPGHKI
XP_008448704.1 PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo]1.2e-3680.49Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL
        MQSAMEKLSNMGSVAK KLKICRAKLDEKVEKAS KT E +KI +ER+KAA AEAKRELHEAKARHAAQKL +RKSHV     LHHH P  VEGGAATHL
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL

Query:  GG-ANVPAYPIASHD-YYPGHKI
        GG  NVPAYPIAS + YYPGHKI
Subjt:  GG-ANVPAYPIASHD-YYPGHKI
XP_022923386.1 late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata]3.7e-3377.5Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG
        MQSAMEKLSNMGSVAK KLKICRAKLDEKV+KAS KT E +KIA+ER+KAAEAEAKRELHEAKARHAAQKL +R+SHV+    HHQPP VEGG+A     
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG

Query:  ANVPAYPIASHD-YYPGHKI
        ANVPAYPIAS + YYPGH+I
Subjt:  ANVPAYPIASHD-YYPGHKI
XP_038906206.1 late embryogenesis abundant protein 6-like [Benincasa hispida]7.5e-3478.33Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVL--HHHQPPVVEGGAATHLGGA
        MQSAMEKLSNMGSVAK KLKICRAKLDEKVEKAS KT E +KIA+ER+KAA AEAKRELHEAKARHAAQKL S+KSHVL  H H  P +EG AAT+LG A
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVL--HHHQPPVVEGGAATHLGGA

Query:  NVP-AYPI-ASHDYYPGHKI
        NVP AYPI  +  YYPGHKI
Subjt:  NVP-AYPI-ASHDYYPGHKI
TrEMBL top hitse value%identityAlignment
A0A1S3BKB4 uncharacterized protein LOC1034907956.0e-3780.49Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL
        MQSAMEKLSNMGSVAK KLKICRAKLDEKVEKAS KT E +KI +ER+KAA AEAKRELHEAKARHAAQKL +RKSHV     LHHH P  VEGGAATHL
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL

Query:  GG-ANVPAYPIASHD-YYPGHKI
        GG  NVPAYPIAS + YYPGHKI
Subjt:  GG-ANVPAYPIASHD-YYPGHKI
A0A5D3CHS9 Seed maturation protein6.0e-3780.49Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL
        MQSAMEKLSNMGSVAK KLKICRAKLDEKVEKAS KT E +KI +ER+KAA AEAKRELHEAKARHAAQKL +RKSHV     LHHH P  VEGGAATHL
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-----LHHHQPPVVEGGAATHL

Query:  GG-ANVPAYPIASHD-YYPGHKI
        GG  NVPAYPIAS + YYPGHKI
Subjt:  GG-ANVPAYPIASHD-YYPGHKI
A0A6J1CVP3 late embryogenesis abundant protein 182.4e-3377.78Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRK-SHVLHHHQPPVVEGGAATHLGGAN
        MQSAMEKLSNMGSVAK KL ICRAKLDEKV+K++ KT E K+I KER+KA EAEAKRELHEAKARHAAQKLSSRK SHV   H P  VEGGAATHL GAN
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRK-SHVLHHHQPPVVEGGAATHLGGAN

Query:  VPAYPIASHDYYP-GHK
        VPAYP+ S  Y P GHK
Subjt:  VPAYPIASHDYYP-GHK
A0A6J1E6N7 late embryogenesis abundant protein 6-like isoform X11.8e-3377.5Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG
        MQSAMEKLSNMGSVAK KLKICRAKLDEKV+KAS KT E +KIA+ER+KAAEAEAKRELHEAKARHAAQKL +R+SHV+    HHQPP VEGG+A     
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG

Query:  ANVPAYPIASHD-YYPGHKI
        ANVPAYPIAS + YYPGH+I
Subjt:  ANVPAYPIASHD-YYPGHKI
A0A6J1HN56 late embryogenesis abundant protein 6-like isoform X11.2e-3275Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG
        MQSAMEKLSNMGSVAK KLKICRAKL+EKV+KAS KT E +KI +ER+KAAEAE KRELHEAKARHAAQKL +R+SHVL    HHQPPV EG A      
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLH---HHQPPVVEGGAATHLGG

Query:  ANVPAYPIASHD-YYPGHKI
        ANVPAYPIAS + YYPGH+I
Subjt:  ANVPAYPIASHD-YYPGHKI
SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 64.9e-1246.55Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-LHHHQPPVVEGGAATHLGGAN
        MQSA +K+S+M S AK K+ IC+AK DEK E+A  +T E K+IA +R+KA EAEA  ++H AKA HA  KL +++SH  +  H P V +         A 
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-LHHHQPPVVEGGAATHLGGAN

Query:  VPA-YPIASHDYYPGH
        VPA  P+  H Y  GH
Subjt:  VPA-YPIASHDYYPGH
Q96273 Late embryogenesis abundant protein 181.3e-0744.55Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLHHHQPPVVEGGAATHLGGANV
        MQSA EK+S+M S AK KL I  AK     EK   +T + KK+A+ER+K+ EA+AK +LH++KA HAA       + V  HH P        T   GAN 
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLHHHQPPVVEGGAATHLGGANV

Query:  P
        P
Subjt:  P
Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein3.5e-1346.55Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-LHHHQPPVVEGGAATHLGGAN
        MQSA +K+S+M S AK K+ IC+AK DEK E+A  +T E K+IA +R+KA EAEA  ++H AKA HA  KL +++SH  +  H P V +         A 
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHV-LHHHQPPVVEGGAATHLGGAN

Query:  VPA-YPIASHDYYPGH
        VPA  P+  H Y  GH
Subjt:  VPA-YPIASHDYYPGH
AT2G35300.1 Late embryogenesis abundant protein, group 1 protein9.0e-0944.55Show/hide
Query:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLHHHQPPVVEGGAATHLGGANV
        MQSA EK+S+M S AK KL I  AK     EK   +T + KK+A+ER+K+ EA+AK +LH++KA HAA       + V  HH P        T   GAN 
Subjt:  MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLHHHQPPVVEGGAATHLGGANV

Query:  P
        P
Subjt:  P

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTGCAATGGAGAAGCTCAGCAATATGGGGAGTGTTGCTAAAGCAAAGCTCAAAATTTGTAGAGCCAAACTTGATGAGAAGGTGGAGAAAGCCTCAACAAAGAC
CGTAGAGGGGAAGAAGATTGCAAAAGAGAGAAAAAAGGCAGCCGAGGCAGAGGCGAAGCGGGAACTACATGAGGCGAAAGCCAGACATGCTGCTCAAAAGCTGAGTAGTA
GGAAATCACATGTACTACACCATCACCAACCTCCCGTTGTGGAGGGCGGCGCTGCTACTCATCTTGGCGGAGCAAATGTTCCAGCTTATCCTATAGCCAGCCATGACTAC
TATCCTGGACATAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTGCAATGGAGAAGCTCAGCAATATGGGGAGTGTTGCTAAAGCAAAGCTCAAAATTTGTAGAGCCAAACTTGATGAGAAGGTGGAGAAAGCCTCAACAAAGAC
CGTAGAGGGGAAGAAGATTGCAAAAGAGAGAAAAAAGGCAGCCGAGGCAGAGGCGAAGCGGGAACTACATGAGGCGAAAGCCAGACATGCTGCTCAAAAGCTGAGTAGTA
GGAAATCACATGTACTACACCATCACCAACCTCCCGTTGTGGAGGGCGGCGCTGCTACTCATCTTGGCGGAGCAAATGTTCCAGCTTATCCTATAGCCAGCCATGACTAC
TATCCTGGACATAAAATTTAA
Protein sequenceShow/hide protein sequence
MQSAMEKLSNMGSVAKAKLKICRAKLDEKVEKASTKTVEGKKIAKERKKAAEAEAKRELHEAKARHAAQKLSSRKSHVLHHHQPPVVEGGAATHLGGANVPAYPIASHDY
YPGHKI