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Tan0020145 (gene) of Snake gourd v1 genome

Gene IDTan0020145
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:5870424..5870745
RNA-Seq ExpressionTan0020145
SyntenyTan0020145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044332.1 hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa]3.1e-2059.8Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS
        MSKKVG  LAMAV++L+AISA A S ++DEVIELP DEA+ V +TNME +S RKM+K G     GNG CL++G  C SD NC  GC C+ T +LK+G+CS
Subjt:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS

Query:  PF
        PF
Subjt:  PF

KAE8649030.1 hypothetical protein Csa_015018 [Cucumis sativus]1.8e-2366.99Show/hide
Query:  MEMSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNGG----NGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC
        MEM KKVG LLAMAV++L+ ISARA S ++  VIELP DEASEV  TNME +S RKM+K GG    NG CL+IG  C SDANCL GC CR TL+LK+GLC
Subjt:  MEMSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNGG----NGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC

Query:  SPF
        SPF
Subjt:  SPF

KGN52756.1 hypothetical protein Csa_014977 [Cucumis sativus]7.9e-0847.47Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC
        MSKK  V+LAM  VLLVA S RA   + IDE  E+  D   EV    +E  ++PRK+ ++NGG+  G CLL+G  C SDA+C  GC C+   LL +G C
Subjt:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC

TYK29460.1 hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa]1.4e-0750.52Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVG
        MSKK  V+LAMA VLLVA S RA   + IDEVIE     + EV    +E  ++PRK+ +KNGG   G CLL+G  C SDA+C  GC C+   LL +G
Subjt:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVG

TYK29461.1 hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa]1.1e-2060.78Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS
        MSKKVG LLAMAV++L+AISA A S ++DEVIELP DEA+ V +TNME +S RKM+K G     GNG CL++G  C SD NC  GC C+ T +LK+G+CS
Subjt:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS

Query:  PF
        PF
Subjt:  PF

TrEMBL top hitse value%identityAlignment
A0A0A0KY29 Uncharacterized protein3.8e-0847.47Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC
        MSKK  V+LAM  VLLVA S RA   + IDE  E+  D   EV    +E  ++PRK+ ++NGG+  G CLL+G  C SDA+C  GC C+   LL +G C
Subjt:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC

A0A5A7TM06 Uncharacterized protein1.5e-2059.8Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS
        MSKKVG  LAMAV++L+AISA A S ++DEVIELP DEA+ V +TNME +S RKM+K G     GNG CL++G  C SD NC  GC C+ T +LK+G+CS
Subjt:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS

Query:  PF
        PF
Subjt:  PF

A0A5A7TRX6 Uncharacterized protein6.1e-0648.31Show/hide
Query:  MAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC
        MA VLLVA S RA   + IDEVIE     + EV    +E  ++PRK+ +KNGG   G CLL+G  C SDA+C  GC C+   LL +G C
Subjt:  MAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVGLC

A0A5D3E1J3 Uncharacterized protein5.2e-2160.78Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS
        MSKKVG LLAMAV++L+AISA A S ++DEVIELP DEA+ V +TNME +S RKM+K G     GNG CL++G  C SD NC  GC C+ T +LK+G+CS
Subjt:  MSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNG-----GNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCS

Query:  PF
        PF
Subjt:  PF

A0A5D3E1P7 Uncharacterized protein6.5e-0850.52Show/hide
Query:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVG
        MSKK  V+LAMA VLLVA S RA   + IDEVIE     + EV    +E  ++PRK+ +KNGG   G CLL+G  C SDA+C  GC C+   LL +G
Subjt:  MSKKVGVLLAMAVVLLVAISARARS-VDIDEVIELPFDEASEVRSTNME-AYSPRKM-VKNGGN--GGCLLIGNICTSDANCLPGCNCRFTLLLKVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAGCAAGAAGGTTGGTGTGTTGTTAGCAATGGCGGTCGTGCTGCTCGTGGCCATTTCGGCTCGAGCAAGATCCGTCGACATAGACGAGGTGATCGAACTCCC
GTTCGATGAGGCAAGCGAAGTCCGATCGACAAATATGGAGGCTTATTCACCAAGAAAAATGGTGAAAAATGGAGGAAATGGAGGATGCTTGTTGATAGGCAATATATGCA
CAAGCGATGCAAACTGCTTGCCTGGGTGCAACTGCAGATTCACCCTATTACTAAAAGTGGGGTTATGCAGTCCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
GAAAGAGATTATATGGAGATGAGCAAGAAGGTTGGTGTGTTGTTAGCAATGGCGGTCGTGCTGCTCGTGGCCATTTCGGCTCGAGCAAGATCCGTCGACATAGACGAGGT
GATCGAACTCCCGTTCGATGAGGCAAGCGAAGTCCGATCGACAAATATGGAGGCTTATTCACCAAGAAAAATGGTGAAAAATGGAGGAAATGGAGGATGCTTGTTGATAG
GCAATATATGCACAAGCGATGCAAACTGCTTGCCTGGGTGCAACTGCAGATTCACCCTATTACTAAAAGTGGGGTTATGCAGTCCGTTTTAGTCTTAATATG
Protein sequenceShow/hide protein sequence
MEMSKKVGVLLAMAVVLLVAISARARSVDIDEVIELPFDEASEVRSTNMEAYSPRKMVKNGGNGGCLLIGNICTSDANCLPGCNCRFTLLLKVGLCSPF