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Tan0020159 (gene) of Snake gourd v1 genome

Gene IDTan0020159
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein RTE1-HOMOLOG
Genome locationLG02:5435817..5436545
RNA-Seq ExpressionTan0020159
SyntenyTan0020159
Gene Ontology termsGO:0010104 - regulation of ethylene-activated signaling pathway (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044776.1 protein RTE1-HOMOLOG [Cucumis melo var. makuwa]9.9e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
XP_004146489.1 protein RTE1-HOMOLOG isoform X2 [Cucumis sativus]9.9e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
XP_008452120.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo]9.9e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
XP_031740651.1 protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]9.9e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
XP_038884143.1 protein RTE1-HOMOLOG [Benincasa hispida]2.2e-1471.83Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
        R GFR GGWNVVNLAALIFLK RWVSK  VI  FLPFVV  +      GT FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
TrEMBL top hitse value%identityAlignment
A0A0A0KXZ7 Uncharacterized protein4.8e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
A0A1S4DZL7 protein RTE1-HOMOLOG4.8e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
A0A5D3CZH3 Protein RTE1-HOMOLOG4.8e-1573.24Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI  FLPFVV    G     T FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWG-----TMFLTLLTFFTFFLVAWFILGT
A0A6J1C4G0 protein RTE1-HOMOLOG1.5e-1369.01Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
        R GFR+GGWNVVNLA LIFLK RWVS   VI  FLPFVV         GT FLT L FFTFFLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
A0A6J1JA62 protein RTE1-HOMOLOG4.5e-1369.01Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
        R GFRTGGWNVVNLAALIFLK RWVSK  VI   LPFVV         GT FLT L FF  FLV WFILGT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLH-----WGTMFLTLLTFFTFFLVAWFILGT
SwissProt top hitse value%identityAlignment
Q9SD42 Protein RTE1-HOMOLOG7.4e-0538.03Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
        R   ++GGWNVVNLA L+  K RWV+K  ++ + LP ++      L  G  F+   +     L  WFI+GT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
Arabidopsis top hitse value%identityAlignment
AT2G26070.1 Protein of unknown function (DUF778)8.4e-0438.1Show/hide
Query:  WNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWGTM-----FLTLLTFFTFFLVAWFILGT
        WN+VN+A L+ +K +W++   V+ +FLP  V    G +     FL  L+ F+  L AWFI+ T
Subjt:  WNVVNLAALIFLKSRWVSKEVVIWAFLPFVVDLHWGTM-----FLTLLTFFTFFLVAWFILGT
AT3G51040.1 RTE1-homolog5.2e-0638.03Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
        R   ++GGWNVVNLA L+  K RWV+K  ++ + LP ++      L  G  F+   +     L  WFI+GT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
AT3G51040.2 RTE1-homolog5.2e-0638.03Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
        R   ++GGWNVVNLA L+  K RWV+K  ++ + LP ++      L  G  F+   +     L  WFI+GT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
AT3G51040.3 RTE1-homolog5.2e-0638.03Show/hide
Query:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT
        R   ++GGWNVVNLA L+  K RWV+K  ++ + LP ++      L  G  F+   +     L  WFI+GT
Subjt:  RSGFRTGGWNVVNLAALIFLKSRWVSKEVVIWAFLPFVV-----DLHWGTMFLTLLTFFTFFLVAWFILGT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAGTCCAAGCTATCGCACATCTAGCACGCCAAGCATCGTCCAGGGCACCTTCAGTCGTCGTCCATCACTGGACACCCAACCCCGAGCCATCGTCATTCTTCATTT
TGCAGCCTGGTGTCTTCTTCTTCCCCACGTCGAGCAGCTAGCCATCATGTCTCAGTCGACCCTTGTTGTGTGCCACTATAGAAAATTGGCAATCACTGCAAGTCTTGTTG
AAAATGGTCACTCTTGTAGATCGGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTTAAGAGTCGGTGGGTTAGTAAAGAAGTTGTTATC
TGGGCGTTCTTACCATTTGTTGTGGACTTGCACTGGGGTACTATGTTCTTAACCTTATTGACATTCTTCACTTTCTTCCTTGTTGCTTGGTTCATTCTTGGTACTTCTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGCGCAGTCCAAGCTATCGCACATCTAGCACGCCAAGCATCGTCCAGGGCACCTTCAGTCGTCGTCCATCACTGGACACCCAACCCCGAGCCATCGTCATTCTTCATTT
TGCAGCCTGGTGTCTTCTTCTTCCCCACGTCGAGCAGCTAGCCATCATGTCTCAGTCGACCCTTGTTGTGTGCCACTATAGAAAATTGGCAATCACTGCAAGTCTTGTTG
AAAATGGTCACTCTTGTAGATCGGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTTAAGAGTCGGTGGGTTAGTAAAGAAGTTGTTATC
TGGGCGTTCTTACCATTTGTTGTGGACTTGCACTGGGGTACTATGTTCTTAACCTTATTGACATTCTTCACTTTCTTCCTTGTTGCTTGGTTCATTCTTGGTACTTCTTA
A
Protein sequenceShow/hide protein sequence
MRSPSYRTSSTPSIVQGTFSRRPSLDTQPRAIVILHFAAWCLLLPHVEQLAIMSQSTLVVCHYRKLAITASLVENGHSCRSGFRTGGWNVVNLAALIFLKSRWVSKEVVI
WAFLPFVVDLHWGTMFLTLLTFFTFFLVAWFILGTS