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Tan0020194 (gene) of Snake gourd v1 genome

Gene IDTan0020194
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBeta-galactosidase
Genome locationLG05:73147740..73148647
RNA-Seq ExpressionTan0020194
SyntenyTan0020194
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28385.1 hypothetical protein Acr_00g0001480 [Actinidia rufa]1.5e-0688.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
GFS28393.1 hypothetical protein Acr_00g0001530 [Actinidia rufa]1.5e-0688.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
GFS28793.1 hypothetical protein Acr_00g0004000 [Actinidia rufa]1.5e-0688.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
GFY85603.1 hypothetical protein Acr_04g0003410 [Actinidia rufa]1.2e-0682.05Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSRRHGR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR   R
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSRRHGR
GFY94925.1 glycoside hydrolase family 2 protein [Actinidia rufa]1.5e-0688.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
TrEMBL top hitse value%identityAlignment
A0A7J0D6K4 Uncharacterized protein7.4e-0788.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
A0A7J0D7A3 Uncharacterized protein7.4e-0788.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
A0A7J0D8G4 Uncharacterized protein7.4e-0788.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
A0A7J0EGK2 Uncharacterized protein5.7e-0782.05Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSRRHGR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR   R
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSRRHGR
A0A7J0F8B7 Beta-galactosidase7.4e-0788.57Show/hide
Query:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
        +V  VDPEQIGVDLVAFAVDSNPDVDPTQL GDSR
Subjt:  SVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCGCCATACGCGCACCGGACATTACACCAATTGTGGGTGGCAACAACAAAAGCGCGACGGGGCTTCCCTTTCATTACTTCTTTCACGACGAGGAGGCCGCGTCCG
CATCCGCATCGATCGAAGTGGTGGGAACGCCTCCCGAGTCAAAGAGAGAGCTCACACTCTCTCCAAGAGATACGATTCGAGATCTCGAGATGGTGAAGAGAGTGAAGAGG
CGGCACTCTCTCTAGCCTTGACCCACGAGGAAGCCTCTTCTTCTTCGGTCTACATCAAGTGCATTGAATGCCCCACAATCGAGAATCAAAGAGGATGGGTCAAGGAGAAG
TTCGGGATTAAAACACGAGTGGATCTGCGCAGAAAGCGGAGCCTCCGGGGATATGGCGGCTTGTCTTTGTGCAATTCAAGCGTCAGGGCGGTAGATCCAGAGCAAATAGG
CGTTGACTTAGTTGCTTTTGCAGTGGATTCTAATCCCGATGTTGATCCGACGCAACTACACGGTGATAGTCGCAGACACGGGAGAGTGAATCTATTCCACCGCAAACAAC
CAATATATACTACTGCTGGATCTTCCGCGACACGTTGTTATTGTTCTCACTGTCACTACGCCACCTCAGTGAATTTGGGTGGAATCGCTCGTGATCTCGCACTCCCAACC
TTTTCTATCGAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACCGCCATACGCGCACCGGACATTACACCAATTGTGGGTGGCAACAACAAAAGCGCGACGGGGCTTCCCTTTCATTACTTCTTTCACGACGAGGAGGCCGCGTCCG
CATCCGCATCGATCGAAGTGGTGGGAACGCCTCCCGAGTCAAAGAGAGAGCTCACACTCTCTCCAAGAGATACGATTCGAGATCTCGAGATGGTGAAGAGAGTGAAGAGG
CGGCACTCTCTCTAGCCTTGACCCACGAGGAAGCCTCTTCTTCTTCGGTCTACATCAAGTGCATTGAATGCCCCACAATCGAGAATCAAAGAGGATGGGTCAAGGAGAAG
TTCGGGATTAAAACACGAGTGGATCTGCGCAGAAAGCGGAGCCTCCGGGGATATGGCGGCTTGTCTTTGTGCAATTCAAGCGTCAGGGCGGTAGATCCAGAGCAAATAGG
CGTTGACTTAGTTGCTTTTGCAGTGGATTCTAATCCCGATGTTGATCCGACGCAACTACACGGTGATAGTCGCAGACACGGGAGAGTGAATCTATTCCACCGCAAACAAC
CAATATATACTACTGCTGGATCTTCCGCGACACGTTGTTATTGTTCTCACTGTCACTACGCCACCTCAGTGAATTTGGGTGGAATCGCTCGTGATCTCGCACTCCCAACC
TTTTCTATCGAGATTTAG
Protein sequenceShow/hide protein sequence
MYRHTRTGHYTNCGWQQQKRDGASLSLLLSRRGGRVRIRIDRSGGNASRVKERAHTLSKRYDSRSRDGEESEEAALSLALTHEEASSSSVYIKCIECPTIENQRGWVKEK
FGIKTRVDLRRKRSLRGYGGLSLCNSSVRAVDPEQIGVDLVAFAVDSNPDVDPTQLHGDSRRHGRVNLFHRKQPIYTTAGSSATRCYCSHCHYATSVNLGGIARDLALPT
FSIEI