; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020204 (gene) of Snake gourd v1 genome

Gene IDTan0020204
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationLG07:7919160..7922293
RNA-Seq ExpressionTan0020204
SyntenyTan0020204
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7130067.1 hypothetical protein RHSIM_Rhsim10G0136600 [Rhododendron simsii]2.3e-1946.09Show/hide
Query:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCS
        F K+L E DD   K E+D YL E CE     FNIL+WW++NS KY ILS++A+D  AIP+S    E+ FS G  I+D +HSSL PK  E +IC+++WL +
Subjt:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCS

Query:  QKNIYTDDEITDEIQ
            +  +E  +E+Q
Subjt:  QKNIYTDDEITDEIQ

KAF7130655.1 hypothetical protein RHSIM_Rhsim10G0136400 [Rhododendron simsii]3.0e-1946.09Show/hide
Query:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCS
        F K+L E DD   K E+D YL E CE     FNIL+WW++NS KY ILS++A+D  AIPLS    ++ FS G  I+D +HSSL PK  E +IC+++WL +
Subjt:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCS

Query:  QKNIYTDDEITDEIQ
            +  +E  +E+Q
Subjt:  QKNIYTDDEITDEIQ

KAF7826472.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Senna tora]6.0e-2043.41Show/hide
Query:  LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL
        + F + + E D+  NKS++D YL EP E   + F+IL+WW++NS+K+ IL+ +A+D+ A+P+S    ES FS G  ++D Y SSL PKT E +IC +NW 
Subjt:  LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL

Query:  CSQKNIYTDDEITDEIQFELLENGGFQST
         S+      +E  D+I  E LE GG  ST
Subjt:  CSQKNIYTDDEITDEIQFELLENGGFQST

TXG72885.1 hypothetical protein EZV62_001464 [Acer yangbiense]2.1e-2049.17Show/hide
Query:  MDLGEEDYDDL---AFTKFLMEHDDWYNKSELDVYLSEPCEGAK-NTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLP
        +D GE D D L    + K + E D   NK+E+D YL E CE    + F+IL WW++ SSKYKILS +A+DI AIP+S    ES FS G+ ILD + SSL 
Subjt:  MDLGEEDYDDL---AFTKFLMEHDDWYNKSELDVYLSEPCEGAK-NTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLP

Query:  PKTAEIVICLRNWLCSQKNI
        P+T E +IC++NWL S   I
Subjt:  PKTAEIVICLRNWLCSQKNI

XP_030936903.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus lobata]1.8e-1941.1Show/hide
Query:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH
        + MD+ +E+ DD       + K L E +   NKSE+D +L+E CEG  N  F+IL WW++NS KY+ILS++A+D+ A+P+S    ES FS G  +LD + 
Subjt:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH

Query:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLENGGFQ
        SSL PK  E +IC +NWL S        E  D+I+ +E +++  F+
Subjt:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLENGGFQ

TrEMBL top hitse value%identityAlignment
A0A5A7U8W5 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.2e-1936.91Show/hide
Query:  SDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDW
        S  + +E++ASC+ +           + +   E +    ++++D YLS+PCE   + F++L WW++N+ KY ILSK+A+DIFA+P+S    ES FS G  
Subjt:  SDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDW

Query:  ILDLYHSSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQF-ELLENG
        ILD + SSL PKT E +IC +NW+  +  +       +E++  E +ENG
Subjt:  ILDLYHSSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQF-ELLENG

A0A5B7B4D6 BED-type domain-containing protein2.2e-2042.66Show/hide
Query:  DASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWI
        D   +E+EA  +   L  E      F K L E +   +KSE+D YL E  E   + F ILDWWRMNSS+Y+ILS++A+D+ AIP++    ES FS G  I
Subjt:  DASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWI

Query:  LDLYHSSLPPKTAEIVICLRNWL-CSQKNIYTDDEITDEIQFE
        LD +HSSL PK  E +IC ++WL  S   I  ++ + D  + E
Subjt:  LDLYHSSLPPKTAEIVICLRNWL-CSQKNIYTDDEITDEIQFE

A0A5C7IUL9 BED-type domain-containing protein1.0e-2049.17Show/hide
Query:  MDLGEEDYDDL---AFTKFLMEHDDWYNKSELDVYLSEPCEGAK-NTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLP
        +D GE D D L    + K + E D   NK+E+D YL E CE    + F+IL WW++ SSKYKILS +A+DI AIP+S    ES FS G+ ILD + SSL 
Subjt:  MDLGEEDYDDL---AFTKFLMEHDDWYNKSELDVYLSEPCEGAK-NTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLP

Query:  PKTAEIVICLRNWLCSQKNI
        P+T E +IC++NWL S   I
Subjt:  PKTAEIVICLRNWLCSQKNI

A0A7N2KQS5 BED-type domain-containing protein8.5e-2042.25Show/hide
Query:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH
        + MD+ +E+ DD       + K L E +   NKSE+D +L+E CEG  N  F+IL WW++NS KY+ILS++A+D+ A+P+S    ES FS G  +LD + 
Subjt:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH

Query:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLEN
        SSL PK  E +IC +NWL S        E  D+I+ +E +E+
Subjt:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLEN

A0A7N2MJW3 Uncharacterized protein6.5e-2042.25Show/hide
Query:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH
        + MD+ +E+ DD       + K L E +   NKSE+D +L+E CEG  N  F+IL WW++NS KY+ILS++A+D+ A+P+S    ES FS G  +LD + 
Subjt:  KSMDLGEEDYDD-----LAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNT-FNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYH

Query:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLEN
        SSL PK  E +IC +NWL S        E  D+I+ +E +E+
Subjt:  SSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQ-FELLEN

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 12.4e-1137.4Show/hide
Query:  SSDASNVESEASCKSMDLGEEDYDDLAFTKFLME-HDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSI-
        ++ AS   ++A+  S   G  D+D      +L E       KSEL+ YL E        F+IL+WW++N+ KY  LSKMA+DI AIP+S  ++ S  SI 
Subjt:  SSDASNVESEASCKSMDLGEEDYDDLAFTKFLME-HDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSI-

Query:  ----GDWILDLYHSSLPPKTAEIVICLRNWL
            G  +LD Y SS  P+  E ++C ++WL
Subjt:  ----GDWILDLYHSSLPPKTAEIVICLRNWL

P03010 Putative AC9 transposase2.5e-1333.58Show/hide
Query:  SNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDW--YNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESN
        S+CS  A   ++  +    D   E+ DD  F  +L E  D+     +ELD Y+SEP       F+IL WWR   ++Y IL+++A+D+ AI +S    ES 
Subjt:  SNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDW--YNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESN

Query:  FSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQK
        FS G  ++D Y + L  +  E +IC ++W+ + +
Subjt:  FSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQK

P08770 Putative AC transposase2.5e-1333.58Show/hide
Query:  SNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDW--YNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESN
        S+CS  A   ++  +    D   E+ DD  F  +L E  D+     +ELD Y+SEP       F+IL WWR   ++Y IL+++A+D+ AI +S    ES 
Subjt:  SNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDW--YNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESN

Query:  FSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQK
        FS G  ++D Y + L  +  E +IC ++W+ + +
Subjt:  FSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQK

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 37.4e-1342.05Show/hide
Query:  SELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPL----SANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL
        SEL+ YL E        F IL+WW++N+ K+  LSKMA+D+ AIP+    S + + S  + G  +LD Y SSL P+T E + C ++WL
Subjt:  SELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPL----SANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER5.5e-1643.88Show/hide
Query:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL
        F  ++ME      KSELD YL E        F++LDWW+ N  KY  LSKMA+DI +IP+SA   +  F +    +D Y +SL P+T E +IC R WL
Subjt:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain1.9e-0833.65Show/hide
Query:  ELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL-CSQKNIYTDDEITDEI
        EL  YLSE     +   ++LDWW++NS +Y  LS MA+D  A+  ++   E  F      +D     +P  + + VIC+R+W+    K  Y   EI  E 
Subjt:  ELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL-CSQKNIYTDDEITDEI

Query:  QFEL
          EL
Subjt:  QFEL

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.9e-1743.88Show/hide
Query:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL
        F  ++ME      KSELD YL E        F++LDWW+ N  KY  LSKMA+DI +IP+SA   +  F +    +D Y +SL P+T E +IC R WL
Subjt:  FTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTACCGGGGACAGCCTTGTTAATCGTTAGGGCTTCCATCAAATTCTTTTACTTCTTCCGCCGCTCAATCTTCGTCTTTCTCTCTTACTTCTTGACTCTTCCAAC
TTTGCCGTCGCCCGCCGCATCCCTCTCTCCCGGCGTCGCCTCCCGCGACTCGGACCTCTGCAGTCGCCTTCCATTGTCGGCGCCTCGTGAGAAGCTATTTTTGTCGCTCT
CGTCAGCTCGTTTGGCCTTGTCAAGCATGGATCCTTGCCATACTAGGGAGGAAGATGCTAACATTGGAAAGAAACATGAGTCTGATCCATCAAATCCAATTAGAAAGAAC
AAACGTAAGCCTGAAGTTGATGGAGGGAATTCTGATACTGATAGTGGCAGAGCTTCTGATGAATTTGATGCACAAAAGAACAACACTGCTAAGATGAACCAAATGGAACT
TAACTCCGACAAGGAACCTAATCAATCAGTGGATAGTGAGGGAGAGGATAGCAACTGTAGTTCAGATGCTTCAAATGTGGAGAGCGAGGCTTCATGTAAATCTATGGATT
TGGGAGAAGAGGATTATGATGATCTCGCGTTTACTAAGTTCTTGATGGAGCACGATGACTGGTATAATAAATCAGAACTGGATGTGTATTTATCCGAACCTTGTGAGGGA
GCCAAGAACACGTTTAATATATTAGATTGGTGGAGAATGAATTCCTCAAAGTACAAAATCCTCAGTAAAATGGCGAAGGACATATTCGCGATCCCGCTTTCTGCTAACGT
CCTAGAATCGAATTTTAGCATCGGAGATTGGATACTCGATTTATATCATAGTTCTTTACCTCCAAAAACAGCTGAGATTGTGATTTGTTTGCGAAATTGGCTTTGCTCAC
AAAAGAATATCTATACTGATGATGAAATAACTGATGAGATTCAATTTGAACTGCTGGAGAATGGAGGGTTTCAATCAACATACATGGAGCTGGAGACAGGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTACCGGGGACAGCCTTGTTAATCGTTAGGGCTTCCATCAAATTCTTTTACTTCTTCCGCCGCTCAATCTTCGTCTTTCTCTCTTACTTCTTGACTCTTCCAAC
TTTGCCGTCGCCCGCCGCATCCCTCTCTCCCGGCGTCGCCTCCCGCGACTCGGACCTCTGCAGTCGCCTTCCATTGTCGGCGCCTCGTGAGAAGCTATTTTTGTCGCTCT
CGTCAGCTCGTTTGGCCTTGTCAAGCATGGATCCTTGCCATACTAGGGAGGAAGATGCTAACATTGGAAAGAAACATGAGTCTGATCCATCAAATCCAATTAGAAAGAAC
AAACGTAAGCCTGAAGTTGATGGAGGGAATTCTGATACTGATAGTGGCAGAGCTTCTGATGAATTTGATGCACAAAAGAACAACACTGCTAAGATGAACCAAATGGAACT
TAACTCCGACAAGGAACCTAATCAATCAGTGGATAGTGAGGGAGAGGATAGCAACTGTAGTTCAGATGCTTCAAATGTGGAGAGCGAGGCTTCATGTAAATCTATGGATT
TGGGAGAAGAGGATTATGATGATCTCGCGTTTACTAAGTTCTTGATGGAGCACGATGACTGGTATAATAAATCAGAACTGGATGTGTATTTATCCGAACCTTGTGAGGGA
GCCAAGAACACGTTTAATATATTAGATTGGTGGAGAATGAATTCCTCAAAGTACAAAATCCTCAGTAAAATGGCGAAGGACATATTCGCGATCCCGCTTTCTGCTAACGT
CCTAGAATCGAATTTTAGCATCGGAGATTGGATACTCGATTTATATCATAGTTCTTTACCTCCAAAAACAGCTGAGATTGTGATTTGTTTGCGAAATTGGCTTTGCTCAC
AAAAGAATATCTATACTGATGATGAAATAACTGATGAGATTCAATTTGAACTGCTGGAGAATGGAGGGTTTCAATCAACATACATGGAGCTGGAGACAGGCAATTAG
Protein sequenceShow/hide protein sequence
MQVPGTALLIVRASIKFFYFFRRSIFVFLSYFLTLPTLPSPAASLSPGVASRDSDLCSRLPLSAPREKLFLSLSSARLALSSMDPCHTREEDANIGKKHESDPSNPIRKN
KRKPEVDGGNSDTDSGRASDEFDAQKNNTAKMNQMELNSDKEPNQSVDSEGEDSNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEG
AKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQFELLENGGFQSTYMELETGN