CuGenDBv2

Gene ID	Tan0020210
Organism	Trichosanthes anguina (Snake gourd v1)
Description	La-related protein 6 isoform 1
Genome location	LG08:10829178..10831885
RNA-Seq Expression	Tan0020210
Synteny	Tan0020210
Gene Ontology terms	GO:0034599 - cellular response to oxidative stress (biological process) GO:0071470 - cellular response to osmotic stress (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7020916.1 hypothetical protein SDJN02_17604 [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-80

86.6

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G R EDDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

XP_022938204.1 uncharacterized protein LOC111444353 [Cucurbita moschata]

3.9e-80

86.6

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G R EDDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

XP_022969609.1 uncharacterized protein LOC111468585 [Cucurbita maxima]

7.9e-81

87.11

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP AD+PNGL+RGNENRLA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G REEDDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

XP_023536753.1 uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo]

2.5e-79

86.53

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDD
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G R EDDDD
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDD

XP_038889537.1 uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]

1.3e-80

85.49

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Query:  MSLASSQLSFLATALT-----RSPRRSNNLLHSPNPILSSKLPPAADDPNG-LKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFL+TA +     R+PRR+NNLLHS N  +S KLPPAADDPNG L RG+ENRLA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLATALT-----RSPRRSNNLLHSPNPILSSKLPPAADDPNG-LKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRPSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDD
        PR SSPRINNNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P+ VAVGIGGGFD+L LFI LGTVAAFVRRFFGRRE+DDD
Subjt:  PRPSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BRQ8 uncharacterized protein LOC103492785

8.5e-73

78.76

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Query:  MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFL+TA   + SP R++N  LL+S + ++S KLPPA+DDP    +GNENR+A LAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
        PSSPRINNNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P TVAVGIGGG DVL  FI LG+VAAFVR+  GRRE DDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

A0A5A7U097 La-related protein 6 isoform 1

8.5e-73

78.76

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Query:  MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSL SSQLSFL+TA   + SP R++N  LL+S + ++S KLPPA+DDP    +GNENR+A LAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
        PSSPRINNNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P TVAVGIGGG DVL  FI LG+VAAFVR+  GRRE DDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

A0A6J1DIH1 uncharacterized protein LOC111020818

2.4e-75

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Query:  MSLASSQLSFL-------ATALTRSPRRSNNLLHSPNPILSSKLPPAADDPNGLK----RGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA
        M+LASSQ SFL       A A  R PRR   LLHS N  +SSKLPP ADDP+G       GNENRLA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA
Subjt:  MSLASSQLSFL-------ATALTRSPRRSNNLLHSPNPILSSKLPPAADDPNGLK----RGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA

Query:  FRSAAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
        FRSAAPRPSSPRINNNSRTNIYINP VAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP PS VAVGIGGGFD+L LFIFLG+VAA VRRFFG RE+DDDDY
Subjt:  FRSAAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

A0A6J1FDE3 uncharacterized protein LOC111444353

1.9e-80

86.6

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G R EDDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

A0A6J1I348 uncharacterized protein LOC111468585

3.8e-81

87.11

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Query:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP AD+PNGL+RGNENRLA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
Subjt:  MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY
         SSPRINNNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFVRRF G REEDDDDY
Subjt:  PSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57345.1 unknown protein

2.2e-49

59.07

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Query:  SLASSQLSFLATALT---RSPRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPS
        ++ASS+ SFL+   +       +SN  L  PN I         DD     R NEN+LA LAI TLA GVL LGSV DA AAK+GGR+GGQAFRS+APRP 
Subjt:  SLASSQLSFLATALT---RSPRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPS

Query:  SPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRR--EEDDDDY
         PRINN SRTNIY+NP+VAPPL+GGYGYG     YGG+GWSPFSFFAP P+ VAVG+GGGFD+L+LF+F G  +A  R FF  R  E+D+DDY
Subjt:  SPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRR--EEDDDDY

Sequences

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CDS sequence

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ATGTCATTAGCCTCATCGCAACTCAGTTTTCTCGCCACCGCCCTCACCCGCAGCCCCCGCCGGAGCAACAACCTTCTCCATTCTCCCAATCCCATCCTTTCCTCTAAACT
CCCTCCCGCCGCCGATGATCCCAATGGATTAAAGAGGGGAAATGAGAATCGGCTCGCGACGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGACATTGGGATCGGTTC
ATGATGCCTCGGCTGCCAAGACCGGCGGCCGTGTCGGCGGCCAGGCCTTCCGGTCGGCGGCTCCTCGTCCCTCATCACCGAGAATCAACAACAATTCGAGGACAAATATC
TACATAAATCCAAGAGTAGCACCTCCTTTAGTAGGTGGCTATGGCTATGGTTATGGAGTGCCATACTATGGAGGATGGGGATGGTCACCATTTTCATTCTTTGCACCAGC
CCCAAGTACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTGTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTTAGGAGATTCTTTGGAAGAAGGGAAG
AAGATGATGATGATTATTGA

mRNA sequence

Show/hide mRNA sequence

TATTTTAATCGTCATTTTGTATAGCTATAATCGTTGGTACAAAAATCTTGAAACTTCCAATGAGGAATTGAAATCATTCCACGTGGAAACCTCACAGTCATGAAAATTAC
CAAAAACAGAAAAAAAAATTATCTACTTCTTCTTCTTCCTCATTCTCAAATCCAAAAAACCCCGAAAAAACACAAACAAAACCAAAAGAATCTCAAACCCTCCTTCTCCG
TTCCTCCATTGAAGCACGCTTCAATTTTTCCCTCGCCATGTCATTAGCCTCATCGCAACTCAGTTTTCTCGCCACCGCCCTCACCCGCAGCCCCCGCCGGAGCAACAACC
TTCTCCATTCTCCCAATCCCATCCTTTCCTCTAAACTCCCTCCCGCCGCCGATGATCCCAATGGATTAAAGAGGGGAAATGAGAATCGGCTCGCGACGCTTGCGATTGTT
ACTCTGGCGGCTGGGGTTTTGACATTGGGATCGGTTCATGATGCCTCGGCTGCCAAGACCGGCGGCCGTGTCGGCGGCCAGGCCTTCCGGTCGGCGGCTCCTCGTCCCTC
ATCACCGAGAATCAACAACAATTCGAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTAGGTGGCTATGGCTATGGTTATGGAGTGCCATACTATGGAG
GATGGGGATGGTCACCATTTTCATTCTTTGCACCAGCCCCAAGTACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTGTTCTCTTCATTTTTCTTGGAACTGTT
GCAGCTTTTGTTAGGAGATTCTTTGGAAGAAGGGAAGAAGATGATGATGATTATTGAAGTCCTTGGATGGAATGTTAGATCATTTCATAACTTTATATTCACACTTTTGA
ACTTAGCTTTTTGGTGGGAGACTGTTTTTCTTGGTACAAATTGTCACATAATGTATTTGTATAAAGGAGAGACTCTTTGTATTCACAAAGTTAATGTATAAAATGTATAG
TTATTTATTT

Protein sequence

Show/hide protein sequence

MSLASSQLSFLATALTRSPRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNI
YINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

Tan0020210 (gene) of Snake gourd v1 genome