; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020236 (gene) of Snake gourd v1 genome

Gene IDTan0020236
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionproline-rich protein HaeIII subfamily 1-like
Genome locationLG03:60600572..60601150
RNA-Seq ExpressionTan0020236
SyntenyTan0020236
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4457.53Show/hide
Query:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP----SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPPH-------SLDQFDFG
        P  +  +  K+S+ NF M P+ VPIPPSGP+QR S  PPPP    S  I   + + NFGM PKGVPIPPSGPSQRTSD  PPPPH       +  + +FG
Subjt:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP----SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPPH-------SLDQFDFG

Query:  MYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKFI-------LPIPP
        M PKGVPIPPSGPSQRTSD  PPPPH+ +V  N +SK NFGM PKGVPIPPSGPSQRTS+  P PP  +  K         +PIPP
Subjt:  MYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKFI-------LPIPP

RVW39818.1 hypothetical protein CK203_074658 [Vitis vinifera]1.4e-3259.15Show/hide
Query:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP
        NFVM P+  PIPPSGP+ R S  PPPP SF      P   FGM PKGVPIPPSGPSQRTSD  PPP        F FGM PKG PIPPSGPS R S ++P
Subjt:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP

Query:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP
        PPPHSF          FGM PKG PIPPSGPSQRTSD  P P PFA +  F         PIPP
Subjt:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP

XP_010653709.1 PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera]1.4e-3259.15Show/hide
Query:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP
        NFVM P+  PIPPSGP+ R S  PPPP SF      P   FGM PKGVPIPPSGPSQRTSD  PPP        F FGM PKG PIPPSGPS R S ++P
Subjt:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP

Query:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP
        PPPHSF          FGM PKG PIPPSGPSQRTSD  P P PFA +  F         PIPP
Subjt:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP

XP_011654399.2 proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]6.2e-3354.86Show/hide
Query:  MLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSF-APPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPPH
        M+LGA  L+ LGFH     THAR                  PIPP+G N   S   PPPPS +I        F +Y KG+ IPPSGPSQRTSDSSPPPP 
Subjt:  MLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSF-APPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPPH

Query:  SLDQ--FDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP
        ++ Q  FDFGMYPKG+PIPPSGPSQRTSD SPPPP +F    + + F FGMY + VPIPPSG + RTS S P PP
Subjt:  SLDQ--FDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]9.2e-3753.51Show/hide
Query:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP---SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP-------HSLDQFDFGM
        P  +  +  K S+ N  M P  VPIPPSGP+QR S  PPPP   S  I   + + NFGM PKGVPIPPSGPSQRTS   PPPP       +   +   GM
Subjt:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP---SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP-------HSLDQFDFGM

Query:  YPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKF-------ILPIPP
         P+GVPIPP G SQRTSD   PPPH+ +V  N +SK NFGM PKGVPIPPSGPS RTSD  P PP  +  K         +PIPP
Subjt:  YPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKF-------ILPIPP

TrEMBL top hitse value%identityAlignment
A0A1S3B4V4 proline-rich protein HaeIII subfamily 1-like2.8e-3151.93Show/hide
Query:  MASMSSKMLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDS
        MAS S  M+LG   L+ LGFH     THAR                  PIPPSG N   S  PPPP          F F MYPKG+ +PPSGPSQRTSDS
Subjt:  MASMSSKMLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDS

Query:  SPPPPHSL--DQFDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP
        SPPPP ++  ++FDFGMYPKG+ +PPSGPSQRTSD SPPPP +F     E +F        VP+PPSGP+  TSDS P PP
Subjt:  SPPPPHSL--DQFDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP

A0A438DWZ1 Uncharacterized protein6.7e-3359.15Show/hide
Query:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP
        NFVM P+  PIPPSGP+ R S  PPPP SF      P   FGM PKGVPIPPSGPSQRTSD  PPP        F FGM PKG PIPPSGPS R S ++P
Subjt:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP--HSLDQFDFGMYPKGVPIPPSGPSQRTSDDSP

Query:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP
        PPPHSF          FGM PKG PIPPSGPSQRTSD  P P PFA +  F         PIPP
Subjt:  PPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSP-PFAISKKFIL-------PIPP

A0A438IPQ7 Uncharacterized protein7.6e-2958.67Show/hide
Query:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPK-GVPIPPSGPSQRTSDSSPPPPHSLDQ---FDFGMYPKGVPIPPSGPSQRTSDD
        NFVM P+  PIPPSGP+ R S  PPPP SF      P   FGM PK G PIPPSGPS R S+ +PPPPHS  +     FGM PKG PIPPSGPSQRTS D
Subjt:  NFVMYPERVPIPPSGPNQRHSFAPPPP-SFTISKNEPEFNFGMYPK-GVPIPPSGPSQRTSDSSPPPPHSLDQ---FDFGMYPKGVPIPPSGPSQRTSDD

Query:  SPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISK
         PPPP  F      S F FGM PKG PIPPSGPS R S++ P PP + ++
Subjt:  SPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISK

A0A5D3C2C7 Proline-rich protein HaeIII subfamily 1-like2.8e-3151.93Show/hide
Query:  MASMSSKMLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDS
        MAS S  M+LG   L+ LGFH     THAR                  PIPPSG N   S  PPPP          F F MYPKG+ +PPSGPSQRTSDS
Subjt:  MASMSSKMLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDS

Query:  SPPPPHSL--DQFDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP
        SPPPP ++  ++FDFGMYPKG+ +PPSGPSQRTSD SPPPP +F     E +F        VP+PPSGP+  TSDS P PP
Subjt:  SPPPPHSL--DQFDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like4.5e-3753.51Show/hide
Query:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP---SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP-------HSLDQFDFGM
        P  +  +  K S+ N  M P  VPIPPSGP+QR S  PPPP   S  I   + + NFGM PKGVPIPPSGPSQRTS   PPPP       +   +   GM
Subjt:  PTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPP---SFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPP-------HSLDQFDFGM

Query:  YPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKF-------ILPIPP
         P+GVPIPP G SQRTSD   PPPH+ +V  N +SK NFGM PKGVPIPPSGPS RTSD  P PP  +  K         +PIPP
Subjt:  YPKGVPIPPSGPSQRTSDDSPPPPHSFTVSEN-ESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKF-------ILPIPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATGAGTTCTAAAATGCTTTTAGGAGCTTTGGCTCTTATTTTCTTAGGGTTTCATTTTACCACAAACCCAACACATGCTAGAAAACTTGCTGAGAAGGAATC
AAGGTTTAACTTTGTGATGTATCCCGAAAGAGTACCTATTCCCCCGTCGGGGCCAAATCAAAGGCATTCATTTGCTCCTCCACCACCTTCCTTTACTATTTCGAAGAATG
AACCCGAGTTCAATTTTGGGATGTACCCAAAAGGTGTACCTATTCCTCCTTCTGGCCCGAGTCAAAGGACATCAGATTCATCTCCTCCTCCACCCCATTCATTGGATCAA
TTCGATTTCGGAATGTATCCCAAAGGCGTGCCTATTCCTCCTTCTGGACCGAGTCAAAGGACATCGGACGATTCACCTCCTCCACCACATTCATTTACTGTTTCTGAGAA
TGAATCAAAGTTCAATTTTGGGATGTATCCAAAAGGCGTACCTATCCCTCCATCCGGACCGAGCCAAAGAACATCAGACTCTATTCCATCACCTCCCTTCGCTATTTCAA
AGAAGTTCATTTTACCTATTCCTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATGAGTTCTAAAATGCTTTTAGGAGCTTTGGCTCTTATTTTCTTAGGGTTTCATTTTACCACAAACCCAACACATGCTAGAAAACTTGCTGAGAAGGAATC
AAGGTTTAACTTTGTGATGTATCCCGAAAGAGTACCTATTCCCCCGTCGGGGCCAAATCAAAGGCATTCATTTGCTCCTCCACCACCTTCCTTTACTATTTCGAAGAATG
AACCCGAGTTCAATTTTGGGATGTACCCAAAAGGTGTACCTATTCCTCCTTCTGGCCCGAGTCAAAGGACATCAGATTCATCTCCTCCTCCACCCCATTCATTGGATCAA
TTCGATTTCGGAATGTATCCCAAAGGCGTGCCTATTCCTCCTTCTGGACCGAGTCAAAGGACATCGGACGATTCACCTCCTCCACCACATTCATTTACTGTTTCTGAGAA
TGAATCAAAGTTCAATTTTGGGATGTATCCAAAAGGCGTACCTATCCCTCCATCCGGACCGAGCCAAAGAACATCAGACTCTATTCCATCACCTCCCTTCGCTATTTCAA
AGAAGTTCATTTTACCTATTCCTCCATAG
Protein sequenceShow/hide protein sequence
MASMSSKMLLGALALIFLGFHFTTNPTHARKLAEKESRFNFVMYPERVPIPPSGPNQRHSFAPPPPSFTISKNEPEFNFGMYPKGVPIPPSGPSQRTSDSSPPPPHSLDQ
FDFGMYPKGVPIPPSGPSQRTSDDSPPPPHSFTVSENESKFNFGMYPKGVPIPPSGPSQRTSDSIPSPPFAISKKFILPIPP