; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020244 (gene) of Snake gourd v1 genome

Gene IDTan0020244
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationLG01:19578295..19586512
RNA-Seq ExpressionTan0020244
SyntenyTan0020244
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]9.2e-20992.58Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDKN HNMSES+SEQE VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]9.2e-20992.58Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDKN HNMSES+SEQE VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]6.0e-20892.33Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSG+DKN H+MSES+SEQE VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TS+ LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]1.6e-20892.58Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDKN HNMSES+SE E VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]1.0e-20793.09Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDK+ HNMS+SESEQE V KEGIEWIMNLPDVPMKLPPH+E  RTRVECKADAPIHTDTIQYSGAF+SMGVDNSLRLD+FRNNFKIEVIDLKEDDIE
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSDKDTPNEKNTIVFRLHA CERG+ RLTVTSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGP+D+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKKKCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+ WEKRV+L+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC11.0e-20592.35Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDKN HNMSESESEQE V KEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGAF+SMG DNSLRLD+FRNNFKIEVIDLKEDDIE
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTSI+QDEVLAHRLGL+PIRVDPRLF+YSDKD PNE NTIVFRLHA CERG+PRLTVTSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL-PEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQ+TL  EFSNNPIGP+D+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL-PEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+KKCPVNVFDIEDIA GKKRATVARPRDCTLCRECIRG+AWEKRV+L+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC12.8e-20393.7Show/hide
Query:  MSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPAL
        MS+SESEQ + GKEGIEWIMNLPDVPMKLPPH+E  RTRVECKADAPIHTDTIQYSGA++SMGVDNSLRLD+FRNNFKIEVIDL EDDIEFDMIGIDPAL
Subjt:  MSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPAL

Query:  ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLHARCERG+PRLTVTSK LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSD

Query:  KSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV
        KSV NSKPKTYTSFSCSQDTLPEFSNN IGP+DNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELKKKCPV+V
Subjt:  KSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV

Query:  FDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        FDIEDIANGKKRA VARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  FDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC11.7e-20090.28Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MS KDK S ++  S+ EQ  VGKEGIEWIMNLPDVPMKLPPH+E  RTRVECKADAPIHTDTIQYSGA++SMGVDNSL+LD+FRNNFKIEVIDL EDDIE
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLHARCERG+PRLTVTSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQD LPEFS NPIGP+D+DIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATV RPR CTLCRECIRGEAWEKRVSL+RVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC14.4e-20992.58Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSGKDKN HNMSES+SEQE VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC12.9e-20892.33Show/hide
Query:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE
        MSG+DKN H+MSES+SEQE VGKEGIEWIMNLPDVPMKLPPHVE  RTRVECKADAPIHTDTIQYSGA++S+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH RCERG+PRLT TS+ LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEF+NNPIGP+D DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIEDIANGKKRATVARPR CTLCRECIRGEAWEKRVSL+RVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC12.1e-7846.01Show/hide
Query:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE +R+RV        +  T  + G +S  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHARCER--------GEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL  RC R         +P        V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHARCER--------GEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
              F    I P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V +++++  GKK A VA 
Subjt:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        PR  T  RE  R E  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  PRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC16.9e-6638.89Show/hide
Query:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        V+  RT +   +D      ++ + G +     DN   LD F+ N K+ +  L ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTSIIQDE
Subjt:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHARC---------ERGEPRLTVTSKT----LTWLPNGSEFPLVSDKSVSNSKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +C         E+   RL V S+     L W P G +                   
Subjt:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHARC---------ERGEPRLTVTSKT----LTWLPNGSEFPLVSDKSVSNSKPKTYTS

Query:  FSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRA
                  F++NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +K  P  V ++E+  +GKK+A
Subjt:  FSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRA

Query:  TVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  TVARPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC13.0e-7747.43Show/hide
Query:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE +RTRV        +  T  + G ++  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIG
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R       +S       N   +          ++  T+       D  PE     I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIG

Query:  PRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRG
        P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++  GKK A VA  R  T  RE  R 
Subjt:  PRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRDCTLCRECIRG

Query:  EAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        E  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  EAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC12.4e-7946.83Show/hide
Query:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE +RTRV        +  T  + G +S  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHARCER--------GEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL  RC R         +P        V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHARCER--------GEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
              F    I P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V ++++I  GKK A VA 
Subjt:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        PR  T  RE  R E  +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  PRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac11.5e-7342.33Show/hide
Query:  PHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ
        P++E  RT+V        +     YSGA++S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ

Query:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHARCERGEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL
        DEVLAHRLG+IPI+VDPR F +     PN+    ++T++F+L  +CE+          T  SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHARCERGEP-----RLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL

Query:  PEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRDC
        P   + P  P ++DI I +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L +KCP  VFDIED      +   ARP DC
Subjt:  PEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRDC

Query:  TLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        T+CRECIR   +E+ V ++RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  TLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 437.6e-14569.59Show/hide
Query:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+E  RTRV CK D+ IH   I +SGA+SSMGVDNS+RL++F  +FK++VI L E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        KV VANNTS+IQDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G+PR  V +  L WLPNGSE  L+ +   S + PKTYTSF+ S
Subjt:  KVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
        QD+ PEF+ NPI P   DI+IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL K CP  VFDIED+  G+KRATVAR
Subjt:  QDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRDCTLCRECIR-GEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PRDC+LCRECIR G  WE +V L+RVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  PRDCTLCRECIR-GEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein1.0e-13366.67Show/hide
Query:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++  +TRV  K +AP HT +  YSG + SS   D++++L +F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C +  PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA

Query:  RPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein1.0e-13366.67Show/hide
Query:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++  +TRV  K +AP HT +  YSG + SS   D++++L +F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C +  PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA

Query:  RPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRDCTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein6.1e-9466.03Show/hide
Query:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++  +TRV  K +AP HT +  YSG + SS   D++++L +F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAF-SSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C +  PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein3.2e-3433.01Show/hide
Query:  KIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ +LK+D  +F++   D ++ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDLKEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGEPRLTVTSKTL-TWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVAT
        +C   +  L VTS+ L +  P  +      D SVS+S                             III +L  GQE++L A A KG+GK HAKWSP AT
Subjt:  RCERGEPRLTVTSKTL-TWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVAT

Query:  AWYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIANGKKRATVARPRDCTLCRECI-RGEAWEK--RVSLQRVKDHFIFKIESTGALPPEVLF
          +   P++++ E++ D L++E K    +  P  VF ++ +    ++  V  P   T   E I + EA  K   + +    D FIF +ESTGA+    L 
Subjt:  AWYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIANGKKRATVARPRDCTLCRECI-RGEAWEK--RVSLQRVKDHFIFKIESTGALPPEVLF

Query:  TEAVKILEDKCE
          A+ +L+ K +
Subjt:  TEAVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTAAAGATAAGAACTCGCATAATATGTCGGAGTCGGAATCTGAACAAGAAAGTGTTGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGATGTACCCAT
GAAGCTCCCACCACATGTGGAATTTCTGAGGACTCGAGTCGAATGCAAAGCAGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTTCTTCAATGGGTG
TTGATAACAGTTTACGACTGGATCATTTTCGCAACAACTTCAAAATTGAAGTGATTGATCTCAAAGAAGATGACATTGAGTTCGACATGATCGGCATTGATCCAGCACTC
GCTAATGCATTTCGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTCGCCAACAATACATCAATAATCCAAGATGAAGTGCTTGCTCATAG
GTTAGGTCTCATCCCGATTCGTGTTGATCCGAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAAC
GTGGAGAACCTCGTCTTACTGTGACATCAAAAACATTGACGTGGCTGCCAAATGGTAGTGAATTTCCTTTGGTATCTGACAAATCAGTTTCAAACTCAAAACCGAAAACG
TATACTTCTTTTAGTTGCAGCCAAGACACACTTCCAGAATTTTCCAACAATCCAATTGGTCCAAGGGACAATGATATTATAATTGCTAGACTCGGCCCGGGTCAGGAAAT
TGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTACAGAATGCTTCCGGAGGTTGTACTTCTGGAAGAGA
TAGAGGATGAGTTGGCAGAAGAACTCAAAAAGAAATGTCCTGTTAATGTATTTGACATTGAAGACATAGCTAATGGTAAGAAAAGGGCAACTGTAGCACGCCCACGAGAT
TGCACATTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCGTTGCAACGCGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCGTTACC
TCCAGAGGTGCTCTTCACTGAAGCTGTAAAGATATTGGAAGATAAGTGTGAACGTTTAATCGCTGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCCCGCCAAACCCTGCATAGCCGTGCCGCTCAGTCGCCGTCGCCGTCATCTTTCTCGATTTTGCTTCTCCGCCGCACCACGCCGTTCTTCGCCGATCTTCCTCCCTATT
TTGGTCTCAGGTTTATAATGTCCGGTAAAGATAAGAACTCGCATAATATGTCGGAGTCGGAATCTGAACAAGAAAGTGTTGGCAAAGAAGGCATTGAATGGATAATGAAT
CTTCCAGATGTACCCATGAAGCTCCCACCACATGTGGAATTTCTGAGGACTCGAGTCGAATGCAAAGCAGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGC
ATTTTCTTCAATGGGTGTTGATAACAGTTTACGACTGGATCATTTTCGCAACAACTTCAAAATTGAAGTGATTGATCTCAAAGAAGATGACATTGAGTTCGACATGATCG
GCATTGATCCAGCACTCGCTAATGCATTTCGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTCGCCAACAATACATCAATAATCCAAGAT
GAAGTGCTTGCTCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCGAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACT
CCATGCTCGCTGTGAACGTGGAGAACCTCGTCTTACTGTGACATCAAAAACATTGACGTGGCTGCCAAATGGTAGTGAATTTCCTTTGGTATCTGACAAATCAGTTTCAA
ACTCAAAACCGAAAACGTATACTTCTTTTAGTTGCAGCCAAGACACACTTCCAGAATTTTCCAACAATCCAATTGGTCCAAGGGACAATGATATTATAATTGCTAGACTC
GGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTACAGAATGCTTCCGGAGGT
TGTACTTCTGGAAGAGATAGAGGATGAGTTGGCAGAAGAACTCAAAAAGAAATGTCCTGTTAATGTATTTGACATTGAAGACATAGCTAATGGTAAGAAAAGGGCAACTG
TAGCACGCCCACGAGATTGCACATTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCGTTGCAACGCGTGAAGGATCATTTCATTTTTAAGATTGAA
TCAACAGGAGCGTTACCTCCAGAGGTGCTCTTCACTGAAGCTGTAAAGATATTGGAAGATAAGTGTGAACGTTTAATCGCTGAGCTCTCTTGATTCTTCCTATCCAAAAG
AGATGGACCTGTACATTATTTCATTATATTCAGAAGTTACCCATTTTTGTAATATAGGAAATCTCATGTTCTATTTTTCTTTTGAATTGACAGTGGAATAGTAACACTTT
TTGCTGAGCTCAGCTCTCTTGATTCCTCCTAAATTTTATGAATGCGGACTTTCGGAGGTGATCAAATAAGAGAATAGACGAAGATTACATTATTATTTCTTCAATGGAAA
TTTTAATTATTGATCAATTTGTCTTGAATGTGAAAAAGAGGTGATGGATAATCAAATCTATTATTGTTTTTGGATGGTTTATAGATAAGGCTGTTTACTTGCAAGGAATT
CAAATACATCTTTGAATGAATAGAAATCAAAACTGCCTGTACTTTTGGTAGGATGTATTCGAAAGGTATACTGGAATATCTAGATATTTATGTATATTTGATAGGATTTG
TTGATGACAATGTATTATGATATATGATGTTGTAAAGAGC
Protein sequenceShow/hide protein sequence
MSGKDKNSHNMSESESEQESVGKEGIEWIMNLPDVPMKLPPHVEFLRTRVECKADAPIHTDTIQYSGAFSSMGVDNSLRLDHFRNNFKIEVIDLKEDDIEFDMIGIDPAL
ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHARCERGEPRLTVTSKTLTWLPNGSEFPLVSDKSVSNSKPKT
YTSFSCSQDTLPEFSNNPIGPRDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRD
CTLCRECIRGEAWEKRVSLQRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS