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Tan0020264 (gene) of Snake gourd v1 genome

Gene IDTan0020264
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG07:63184814..63185709
RNA-Seq ExpressionTan0020264
SyntenyTan0020264
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]6.7e-2037.5Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        +E  PW + + +L++ E  GS +  D +FRY  FW+ +HNLP A   +++       +G  +++D+ +S  C G  + IR+ IDV  PL+RGL+V +G  
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR
         K     + Y++L +FCY CGKIGH  R
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.0e-2038.02Show/hide
Query:  PWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVMTKEI
        PW + R +++ID P    + +D +FR  S W+H  +L  A   K MA    N +G F+ V+S  + FCWG+ L +R+R DV +PL RG+K+ +       
Subjt:  PWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVMTKEI

Query:  WCPVTYKKLTDFCYRCGKIGH
        W P+ Y++L DF Y CG++ H
Subjt:  WCPVTYKKLTDFCYRCGKIGH

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-2236.72Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        + + PW +++ +L++  P  + + +D  F + +FW+ IHN+P    + +MA +   +LG  ++++   ++   G  + +R++IDV++PLRRG+K+K    
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR
         K+IWCP+ Y+KL DFCY CGKIGH+ R
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.7e-2338.89Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        M+  PW++ + ++++ +P  S+   + EF   +FW+H+ +LP +   K MA    N +G+F  VD  +  F WG +L IR+ ID+T+PLRRG+K+ I   
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHT
            W P+ Y++L DFCY CG IGH+
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHT

XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum]8.7e-2032.57Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        M++ PW   +  L++ +   S+   + EF     W+ +  LP     K++A      LG F +VD  + EF  G  L +++RI++ +PLRRG+ + +G  
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDRAEGDSI-GGEVRAQDTETRVRKTQRKIQSKSLSQPHSTASKGELTAG
         +E WCP+TY+ L DFCY CG+IGHTD+A    +  GE      E R    ++K   +S     +  S G  + G
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDRAEGDSI-GGEVRAQDTETRVRKTQRKIQSKSLSQPHSTASKGELTAG

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein3.2e-2037.5Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        +E  PW + + +L++ E  GS +  D +FRY  FW+ +HNLP A   +++       +G  +++D+ +S  C G  + IR+ IDV  PL+RGL+V +G  
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR
         K     + Y++L +FCY CGKIGH  R
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR

A0A6J1BSZ1 uncharacterized protein LOC1110054815.0e-2138.02Show/hide
Query:  PWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVMTKEI
        PW + R +++ID P    + +D +FR  S W+H  +L  A   K MA    N +G F+ V+S  + FCWG+ L +R+R DV +PL RG+K+ +       
Subjt:  PWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVMTKEI

Query:  WCPVTYKKLTDFCYRCGKIGH
        W P+ Y++L DF Y CG++ H
Subjt:  WCPVTYKKLTDFCYRCGKIGH

A0A6J1D765 uncharacterized protein LOC1110179027.0e-2336.72Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        + + PW +++ +L++  P  + + +D  F + +FW+ IHN+P    + +MA +   +LG  ++++   ++   G  + +R++IDV++PLRRG+K+K    
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR
         K+IWCP+ Y+KL DFCY CGKIGH+ R
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR

A0A6J1DU55 uncharacterized protein LOC1110231358.2e-2438.89Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        M+  PW++ + ++++ +P  S+   + EF   +FW+H+ +LP +   K MA    N +G+F  VD  +  F WG +L IR+ ID+T+PLRRG+K+ I   
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHT
            W P+ Y++L DFCY CG IGH+
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHT

A0A6P4AIH1 uncharacterized protein At4g02000-like2.1e-1934.38Show/hide
Query:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM
        ++  PW++ R ++L +E  GS          A FW+H+HN P    TK   +   + LG    V+S +   C+G  + +RI++D+  PLR G+KV +G  
Subjt:  MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVM

Query:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR
          + W    Y+KL DFC++CG +GHT +
Subjt:  TKEIWCPVTYKKLTDFCYRCGKIGHTDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGAACCTTGGTACTACCATAGAGTTATCCTTCTCATAGATGAGCCCAGAGGATCGAGACGATTTGTTGACCATGAATTCCGATATGCTTCTTTCTGGTTACA
TATCCACAACTTACCACCTGCAGGTCAGACAAAAAAGATGGCTCAAGTTTATAGCAATCGGTTAGGAAGCTTCCAAAAGGTGGACTCATTTGATTCGGAATTTTGCTGGG
GGAATACTTTGTGCATCAGAATTCGGATTGATGTTACAGAACCATTGAGGAGAGGACTGAAGGTGAAGATTGGAGTTATGACCAAGGAGATTTGGTGCCCGGTGACCTAT
AAAAAGCTTACGGATTTCTGTTACAGATGCGGGAAAATCGGACACACAGATCGGGCCGAGGGAGATTCCATCGGGGGAGAAGTGAGGGCTCAGGACACCGAAACGCGAGT
GAGGAAGACCCAGAGGAAGATCCAAAGCAAATCCCTTTCTCAACCCCATTCAACAGCTTCAAAGGGTGAATTGACGGCGGGATTCAAAGAGCATTCAAAGGCTCCACGGG
AAATCAAAACTGCAGTGATTATAGAGGTTTCAAAGGAACTAGGTTTGCCGAAACGGTTTCAGAAGGAAAAAACGAAAAACCAGGCGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGAACCTTGGTACTACCATAGAGTTATCCTTCTCATAGATGAGCCCAGAGGATCGAGACGATTTGTTGACCATGAATTCCGATATGCTTCTTTCTGGTTACA
TATCCACAACTTACCACCTGCAGGTCAGACAAAAAAGATGGCTCAAGTTTATAGCAATCGGTTAGGAAGCTTCCAAAAGGTGGACTCATTTGATTCGGAATTTTGCTGGG
GGAATACTTTGTGCATCAGAATTCGGATTGATGTTACAGAACCATTGAGGAGAGGACTGAAGGTGAAGATTGGAGTTATGACCAAGGAGATTTGGTGCCCGGTGACCTAT
AAAAAGCTTACGGATTTCTGTTACAGATGCGGGAAAATCGGACACACAGATCGGGCCGAGGGAGATTCCATCGGGGGAGAAGTGAGGGCTCAGGACACCGAAACGCGAGT
GAGGAAGACCCAGAGGAAGATCCAAAGCAAATCCCTTTCTCAACCCCATTCAACAGCTTCAAAGGGTGAATTGACGGCGGGATTCAAAGAGCATTCAAAGGCTCCACGGG
AAATCAAAACTGCAGTGATTATAGAGGTTTCAAAGGAACTAGGTTTGCCGAAACGGTTTCAGAAGGAAAAAACGAAAAACCAGGCGAGTTGA
Protein sequenceShow/hide protein sequence
MENEPWYYHRVILLIDEPRGSRRFVDHEFRYASFWLHIHNLPPAGQTKKMAQVYSNRLGSFQKVDSFDSEFCWGNTLCIRIRIDVTEPLRRGLKVKIGVMTKEIWCPVTY
KKLTDFCYRCGKIGHTDRAEGDSIGGEVRAQDTETRVRKTQRKIQSKSLSQPHSTASKGELTAGFKEHSKAPREIKTAVIIEVSKELGLPKRFQKEKTKNQAS