; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020281 (gene) of Snake gourd v1 genome

Gene IDTan0020281
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationLG09:63358942..63359514
RNA-Seq ExpressionTan0020281
SyntenyTan0020281
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588064.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. sororia]4.5e-7685.06Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        MGDSAST  AQPT HPAKSSLPMLYYGLVV+GTA IVLVLYN I+IKWCSD+ H +ASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS AT  AT 
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAE
         +  EEEG GNECAVCLSAFE+GEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPV  P LCQ HTA AAAE
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAE

KAG6590024.1 RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7682.11Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        M DSAS  FAQPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A  TA  
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
          A EEEGNGNEC VCLSAFEEGEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVAVPGL +  T   AAEQ  NSGHGL ESG LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

XP_022960602.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata]7.7e-7681.58Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        M DSAS  FAQPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A      
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
        A A EEEGNGNEC VCLSAFEEGEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVAVPGL +  T   AAEQ  NSGHGL ESG LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

XP_022968369.1 RING-H2 finger protein ATL52-like [Cucurbita maxima]4.2e-8284.21Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        MGDSAST  AQPT HPAKSSLPMLYYGLVV+GTA IVLVLYN I+IKWCSDN H +ASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTA  TAT 
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
            EEEG GNECAVCLSAFE+GEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAP   P LCQ HTA  AAEQ  NSGHGLLES +LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

XP_038879803.1 RING-H2 finger protein ATL39-like [Benincasa hispida]5.3e-7782.11Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        M DS+STSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEM+NSSRSF SS    L SFKFKKGST       
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
        A A EEEG GNECAVCLSAFE+G+EVKKLPRCTHMFHA CIDMWL+SHSDCPLCRAPV   GL QH    A AEQ ENSGHGLLESG+LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

TrEMBL top hitse value%identityAlignment
A0A6J1D0Z7 RING-type E3 ubiquitin transferase1.4e-7580.85Show/hide
Query:  SASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVA
        S+ST F QPTPHPAKSSLPMLYYGLVVVGTAAIVLV+YNFIVI+WCSD R  R SP +A SYAEM++SS SFQSS+RNLLSSF+FKKG     T   A  
Subjt:  SASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVA

Query:  GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAV-PGLCQHHTAAAAAEQPENSGHGLLESGNLV
         EEEGNG ECAVCLSAFE+GEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVA+ PGLCQHHT   AAEQPENSGHGLLESG LV
Subjt:  GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAV-PGLCQHHTAAAAAEQPENSGHGLLESGNLV

A0A6J1EGS5 RING-type E3 ubiquitin transferase7.7e-7484.62Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        MGDSAST  AQPT HPAKSSLPMLYYGLVV+GTA IVLVLYN I+IKWCSD+ H +AS ALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS AT  AT 
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTA
         +  EEEG GNECAVCLSAFE+GEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPV  P LCQ HTA
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTA

A0A6J1H7W2 RING-type E3 ubiquitin transferase3.7e-7681.58Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        M DSAS  FAQPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A      
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
        A A EEEGNGNEC VCLSAFEEGEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVAVPGL +  T   AAEQ  NSGHGL ESG LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

A0A6J1HZG2 RING-type E3 ubiquitin transferase2.0e-8284.21Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        MGDSAST  AQPT HPAKSSLPMLYYGLVV+GTA IVLVLYN I+IKWCSDN H +ASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTA  TAT 
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
            EEEG GNECAVCLSAFE+GEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAP   P LCQ HTA  AAEQ  NSGHGLLES +LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

A0A6J1JJ05 RING-type E3 ubiquitin transferase4.1e-7580.53Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT
        M DSAS  F+QPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS        
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATT

Query:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV
        A A EEEGNGNEC VCLSAFEEGEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVAVPGL +  T   AAEQ  NSGHGL ESG LV
Subjt:  AVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL12.4e-1634.03Show/hide
Query:  STSFAQPT-PHPAKS--SLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD-------NRHRRAS---PALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS
        ST+F  P  P  + S  + P+L   ++ +   A +LV Y   VIK C +        R RR+S   P +  S  E+   +R    S    +  FKFKK  
Subjt:  STSFAQPT-PHPAKS--SLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD-------NRHRRAS---PALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS

Query:  TATTTATTAVAGEEE--GNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGH
                 VAGEE+   N  EC+VCL+ F+E E+++ +P C H+FH  CID+WL  +++CPLCR  V+          +A +   ENS H
Subjt:  TATTTATTAVAGEEE--GNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGH

Q9LF64 RING-H2 finger protein ATL524.9e-1735.71Show/hide
Query:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEGNGNECAVC
        + SS   L   L+ + T+A++LV Y  ++ K+C  +    +S  L  ++    N    F S+ R   +     +    + T     +G+   +G++C+VC
Subjt:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEGNGNECAVC

Query:  LSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA
        LS FEE E ++ LP+C H FH PCID WL SHS+CPLCRA
Subjt:  LSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA

Q9LRB7 E3 ubiquitin-protein ligase EL51.9e-1634.88Show/hide
Query:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYN--FIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSS---------NRNLLSSFKFK
        M +S+S+S   P   PA     M   G+  V    IV       F++++   D R R  +              R   S          +  +L S    
Subjt:  MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYN--FIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSS---------NRNLLSSFKFK

Query:  KGSTATTTATTAVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVP
          S +T  A      EE+ +G ECAVCL+  E+GEE + LPRC H FHA C+DMWL SHS CPLCR  V VP
Subjt:  KGSTATTTATTAVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVP

Q9LSW9 RING-H2 finger protein ATL167.8e-1531.94Show/hide
Query:  SFAQPTPHP-------AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWC------------SDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKF
        SF  P P P         +S P+L   ++ +   A +LV Y   VIK C            S +R RR        Y+  +  SR    S    +  FKF
Subjt:  SFAQPTPHP-------AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWC------------SDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKF

Query:  KKGSTATTTATTAVA-GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPEN
        KK         T     EEE    EC+VCLS F++ E+++ +P C+H+FH  CID+WL ++++CPLCR  V+          +A +  PEN
Subjt:  KKGSTATTTATTAVA-GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPEN

Q9SRQ8 RING-H2 finger protein ATL513.5e-1531.68Show/hide
Query:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEG--------
        + S    L   L+ +  +A +LV Y  ++ K+C   RH  +S + A      ++S  ++Q +N N          + AT    T   G  +G        
Subjt:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEG--------

Query:  -------------NGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA
                       ++C+VCLS F+E E ++ LP+C H FH PCID WL SHS+CPLCRA
Subjt:  -------------NGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein1.7e-1734.03Show/hide
Query:  STSFAQPT-PHPAKS--SLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD-------NRHRRAS---PALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS
        ST+F  P  P  + S  + P+L   ++ +   A +LV Y   VIK C +        R RR+S   P +  S  E+   +R    S    +  FKFKK  
Subjt:  STSFAQPT-PHPAKS--SLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSD-------NRHRRAS---PALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGS

Query:  TATTTATTAVAGEEE--GNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGH
                 VAGEE+   N  EC+VCL+ F+E E+++ +P C H+FH  CID+WL  +++CPLCR  V+          +A +   ENS H
Subjt:  TATTTATTAVAGEEE--GNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGH

AT2G17450.1 RING-H2 finger A3A2.1e-1544.32Show/hide
Query:  STATTTATTAVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENS
        ST T   +T+ A  EEG+  ECA+CL+ F +GEE++ LP C H FH  CID WL S S CP CR  +  P  C     A+ AE  + +
Subjt:  STATTTATTAVAGEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENS

AT3G03550.1 RING/U-box superfamily protein2.5e-1631.68Show/hide
Query:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEG--------
        + S    L   L+ +  +A +LV Y  ++ K+C   RH  +S + A      ++S  ++Q +N N          + AT    T   G  +G        
Subjt:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEG--------

Query:  -------------NGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA
                       ++C+VCLS F+E E ++ LP+C H FH PCID WL SHS+CPLCRA
Subjt:  -------------NGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA

AT5G17600.1 RING/U-box superfamily protein3.5e-1835.71Show/hide
Query:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEGNGNECAVC
        + SS   L   L+ + T+A++LV Y  ++ K+C  +    +S  L  ++    N    F S+ R   +     +    + T     +G+   +G++C+VC
Subjt:  AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEGNGNECAVC

Query:  LSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA
        LS FEE E ++ LP+C H FH PCID WL SHS+CPLCRA
Subjt:  LSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRA

AT5G43420.1 RING/U-box superfamily protein5.6e-1631.94Show/hide
Query:  SFAQPTPHP-------AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWC------------SDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKF
        SF  P P P         +S P+L   ++ +   A +LV Y   VIK C            S +R RR        Y+  +  SR    S    +  FKF
Subjt:  SFAQPTPHP-------AKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWC------------SDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKF

Query:  KKGSTATTTATTAVA-GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPEN
        KK         T     EEE    EC+VCLS F++ E+++ +P C+H+FH  CID+WL ++++CPLCR  V+          +A +  PEN
Subjt:  KKGSTATTTATTAVA-GEEEGNGNECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATTCAGCTTCAACCTCTTTCGCTCAGCCAACGCCTCATCCTGCAAAATCAAGCCTACCCATGTTGTATTATGGCCTTGTGGTCGTCGGAACGGCGGCGATTGT
GTTGGTTCTTTACAATTTCATCGTTATCAAGTGGTGCTCCGACAACCGCCACCGTCGAGCTTCACCGGCGCTGGCCGGGAGTTATGCAGAGATGGTGAATTCAAGCCGCA
GCTTCCAGAGCTCAAATAGGAACTTGTTGTCCAGCTTCAAATTCAAGAAAGGGTCCACGGCCACAACGACGGCGACAACGGCGGTGGCAGGGGAAGAAGAAGGGAATGGG
AATGAATGTGCGGTTTGTTTGTCAGCGTTTGAGGAAGGAGAAGAGGTGAAGAAACTGCCAAGATGCACACATATGTTTCATGCCCCTTGTATAGACATGTGGCTTTACTC
TCATTCCGATTGCCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGCTGTGCCAACACCACACGGCAGCAGCGGCGGCGGAGCAACCGGAGAATTCAGGGCATGGGTTGT
TGGAATCCGGCAACTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATTCAGCTTCAACCTCTTTCGCTCAGCCAACGCCTCATCCTGCAAAATCAAGCCTACCCATGTTGTATTATGGCCTTGTGGTCGTCGGAACGGCGGCGATTGT
GTTGGTTCTTTACAATTTCATCGTTATCAAGTGGTGCTCCGACAACCGCCACCGTCGAGCTTCACCGGCGCTGGCCGGGAGTTATGCAGAGATGGTGAATTCAAGCCGCA
GCTTCCAGAGCTCAAATAGGAACTTGTTGTCCAGCTTCAAATTCAAGAAAGGGTCCACGGCCACAACGACGGCGACAACGGCGGTGGCAGGGGAAGAAGAAGGGAATGGG
AATGAATGTGCGGTTTGTTTGTCAGCGTTTGAGGAAGGAGAAGAGGTGAAGAAACTGCCAAGATGCACACATATGTTTCATGCCCCTTGTATAGACATGTGGCTTTACTC
TCATTCCGATTGCCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGCTGTGCCAACACCACACGGCAGCAGCGGCGGCGGAGCAACCGGAGAATTCAGGGCATGGGTTGT
TGGAATCCGGCAACTTGGTTTAA
Protein sequenceShow/hide protein sequence
MGDSASTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPALAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTATTTATTAVAGEEEGNG
NECAVCLSAFEEGEEVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVAVPGLCQHHTAAAAAEQPENSGHGLLESGNLV