; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020295 (gene) of Snake gourd v1 genome

Gene IDTan0020295
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationLG02:58549647..58550327
RNA-Seq ExpressionTan0020295
SyntenyTan0020295
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]6.1e-3341.4Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR +E   P I   L ++ F KWARA+C R+R   MTTN SES N  + ++R+LPV ++ + +R  LQ+WFY RR  A    T+ +   E ELR Q ++ 
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQAS
        R+  V  +++V++QV++G +Q  V L  K+CTCR+ D  +IPC+HA  VL  + ++T  FVS Y+ ++ L +TY G + PVG  A+
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQAS

XP_008465177.1 PREDICTED: uncharacterized protein LOC103502841 [Cucumis melo]7.0e-3754.25Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR LE SA GI  +LE IGF KW+RA+ P RR + MTTN SES N A+LKARELP+ SM E +RM LQ WF+  R+DA +Q T F+K+ E+ LR+QIE  
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK
        R+++V PV+N++YQV++G  Q+ + L  K C+CRM D L+IPC+H C V + K
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]8.5e-3548.42Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR L+ +  GI  +L  IGF KW+ AF    R + MTTN SES N A+  ARELP+TSM EVVRM LQ WFY R++ A FQ T F+KS E +LR+QI  G
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASWVIP
        RTM VY V+N  YQV++   Q E                             K L TK +VS YYSNN LR+TY+G IHP+G Q+SW IP
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASWVIP

XP_038885920.1 uncharacterized protein LOC120076228 [Benincasa hispida]2.3e-3242.86Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MRQL+  AP I  +LE++G  KWARAFC R+R S MTTN  E  N A+ +ARELPV  + E +R  +Q WFY+RRS  SFQ +  S   E  +R  +   
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVG
        R++ +YP++  +++V + + Q  VN+  +T +CR  D   IPCSHACI LSRK L  + +V  +Y  + LR  Y      +G
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVG

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]6.5e-3541.71Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        M+ +E   P I   L E+GF KWARA+  R+R   MTTN SES +  + ++RE P+ S+ + +R  LQDWFY R   AS   T+ +   E ELR Q    
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASW
        R  +V  ++N +Y+VV+G   + VN+  K+C+C   D  +IPC+HAC VLS   L +  FVS YY +N   +TY   IHP+G  + W
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASW

TrEMBL top hitse value%identityAlignment
A0A1S3CNA2 uncharacterized protein LOC1035028413.4e-3754.25Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR LE SA GI  +LE IGF KW+RA+ P RR + MTTN SES N A+LKARELP+ SM E +RM LQ WF+  R+DA +Q T F+K+ E+ LR+QIE  
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK
        R+++V PV+N++YQV++G  Q+ + L  K C+CRM D L+IPC+H C V + K
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK

A0A5D3CGP0 SWIM-type domain-containing protein3.4e-3754.25Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR LE SA GI  +LE IGF KW+RA+ P RR + MTTN SES N A+LKARELP+ SM E +RM LQ WF+  R+DA +Q T F+K+ E+ LR+QIE  
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK
        R+++V PV+N++YQV++G  Q+ + L  K C+CRM D L+IPC+H C V + K
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRK

A0A5D3DJR8 MuDR family transposase3.0e-3341.4Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR +E   P I   L ++ F KWARA+C R+R   MTTN SES N  + ++R+LPV ++ + +R  LQ+WFY RR  A    T+ +   E ELR Q ++ 
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRR-MSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQAS
        R+  V  +++V++QV++G +Q  V L  K+CTCR+ D  +IPC+HA  VL  + ++T  FVS Y+ ++ L +TY G + PVG  A+
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQAS

A0A5D3E198 MuDRA-like transposase4.3e-3242.31Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MRQLE  +P +  +LE +G HKWARAF  R+R   +TTN SES N  + + RELPV  + E +R  +Q WFY RR+  SFQ T  S   E  +R+ +   
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVG
        R+M +YPVD  +++V +  EQ  VN+  +TC+CR  D   IPCSHACI LS + L+   +   +Y  + L   Y     P+G
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVG

A0A6J1C328 uncharacterized protein LOC1110069944.1e-3548.42Show/hide
Query:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG
        MR L+ +  GI  +L  IGF KW+ AF    R + MTTN SES N A+  ARELP+TSM EVVRM LQ WFY R++ A FQ T F+KS E +LR+QI  G
Subjt:  MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMS-MTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESG

Query:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASWVIP
        RTM VY V+N  YQV++   Q E                             K L TK +VS YYSNN LR+TY+G IHP+G Q+SW IP
Subjt:  RTMQVYPVDNVQYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASWVIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCAACTAGAATTCAGTGCACCTGGTATCTGTGCTGATTTGGAAGAGATAGGGTTTCACAAATGGGCTCGTGCATTCTGTCCTCGTCGACGTATGTCAATGACAAC
CAATCCATCTGAAAGTTATAATAAAGCGATTTTAAAAGCAAGAGAATTGCCAGTAACATCGATGTTTGAAGTTGTCAGAATGTATTTGCAAGATTGGTTCTATAGAAGAA
GGAGTGATGCATCTTTTCAAGCGACTATCTTTTCAAAGTCATGCGAGACTGAGCTACGACAACAGATCGAAAGTGGCAGAACAATGCAGGTATACCCTGTTGATAATGTT
CAGTATCAAGTCGTTAATGGAACTGAACAACATGAAGTTAATCTTTTCCAGAAGACATGTACATGTCGAATGTTGGACCAATTGCAAATTCCTTGTTCACATGCGTGTAT
TGTGTTGTCACGAAAACCCTTGTCCACCAAATATTTTGTGTCTCCTTATTATTCGAACAACATTTTGCGCGCCACCTACAATGGTTTGATTCATCCTGTTGGTGGTCAGG
CAAGTTGGGTCATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCAACTAGAATTCAGTGCACCTGGTATCTGTGCTGATTTGGAAGAGATAGGGTTTCACAAATGGGCTCGTGCATTCTGTCCTCGTCGACGTATGTCAATGACAAC
CAATCCATCTGAAAGTTATAATAAAGCGATTTTAAAAGCAAGAGAATTGCCAGTAACATCGATGTTTGAAGTTGTCAGAATGTATTTGCAAGATTGGTTCTATAGAAGAA
GGAGTGATGCATCTTTTCAAGCGACTATCTTTTCAAAGTCATGCGAGACTGAGCTACGACAACAGATCGAAAGTGGCAGAACAATGCAGGTATACCCTGTTGATAATGTT
CAGTATCAAGTCGTTAATGGAACTGAACAACATGAAGTTAATCTTTTCCAGAAGACATGTACATGTCGAATGTTGGACCAATTGCAAATTCCTTGTTCACATGCGTGTAT
TGTGTTGTCACGAAAACCCTTGTCCACCAAATATTTTGTGTCTCCTTATTATTCGAACAACATTTTGCGCGCCACCTACAATGGTTTGATTCATCCTGTTGGTGGTCAGG
CAAGTTGGGTCATTCCATAA
Protein sequenceShow/hide protein sequence
MRQLEFSAPGICADLEEIGFHKWARAFCPRRRMSMTTNPSESYNKAILKARELPVTSMFEVVRMYLQDWFYRRRSDASFQATIFSKSCETELRQQIESGRTMQVYPVDNV
QYQVVNGTEQHEVNLFQKTCTCRMLDQLQIPCSHACIVLSRKPLSTKYFVSPYYSNNILRATYNGLIHPVGGQASWVIP