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Tan0020300 (gene) of Snake gourd v1 genome

Gene IDTan0020300
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:9827366..9827902
RNA-Seq ExpressionTan0020300
SyntenyTan0020300
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031272.1 hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa]4.9e-1580.36Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   PTA  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
KAB2042822.1 hypothetical protein ES319_D02G244200v1 [Gossypium barbadense]4.2e-0654.39Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP    +     P+P VGF P
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
MBA0799196.1 hypothetical protein [Gossypium harknessii]9.3e-0655.56Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVG
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP    + P   P+P VG
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVG
OAY29431.1 hypothetical protein MANES_15G144200v8 [Manihot esculenta]7.2e-0651.79Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M  QRLE+C++L+R+A+ FV +VAE++G VI Q+S     PT    VP+PFVGF P
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
XP_015874275.1 uncharacterized protein LOC107411246 [Ziziphus jujuba]2.2e-0755.36Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M IQR+E+C+ELL+MA+ FV+VVAE+VG VIHQ   P    ++    P+PF+GFYP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
TrEMBL top hitse value%identityAlignment
A0A0A0K3A1 Uncharacterized protein2.4e-1580.36Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   PTA  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
A0A5D2M247 Uncharacterized protein2.0e-0654.39Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP    +     P+P VGF P
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
A0A5D3C626 Uncharacterized protein2.4e-1580.36Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M IQRLELCLELLRMA+NFVVVVAESVG+VIH+E QP   PTA  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
A0A5J5SGN3 Uncharacterized protein2.0e-0654.39Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
        M +QRLE+C+EL+++AV FVVVVAE+VG VIHQ   PP    +     P+P VGF P
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANP-RVPIPFVGFYP
A0A6P3ZHL2 uncharacterized protein LOC1074112461.1e-0755.36Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
        M IQR+E+C+ELL+MA+ FV+VVAE+VG VIHQ   P    ++    P+PF+GFYP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19030.1 unknown protein8.4e-0544.26Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTAN-------PRVPIPFVGF
        M  Q+LE+C+EL+++AV FV  VAESV E   +   PP  P  +         VPIP VGF
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTAN-------PRVPIPFVGF
AT4G33960.1 unknown protein4.2e-0439.66Show/hide
Query:  MAIQRLELCLELLRMAVNFVVVVAESVGEVI--HQESQPPQRPTANPRVPIPFVGFYP
        M I+R+ELC+EL+++ + FVVVVAE+V  V+  H   + P  P    +  +P+   YP
Subjt:  MAIQRLELCLELLRMAVNFVVVVAESVGEVI--HQESQPPQRPTANPRVPIPFVGFYP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCAAAGACTAGAACTCTGCTTGGAGCTGCTGAGAATGGCCGTCAATTTCGTCGTCGTCGTTGCCGAATCCGTCGGCGAGGTCATCCACCAGGAATCTCAGCC
GCCGCAACGGCCAACGGCGAACCCTCGCGTTCCGATTCCGTTCGTCGGCTTTTACCCCTAA
mRNA sequenceShow/hide mRNA sequence
CGACCGAGAAATTGCTCAAAAAAAAAAAAAAAAAACCAGAGCGACGCGGAAAATTGACAGAAACAAAAAAAAGCCTTTCCAAATTTCCCGATCTCGAAAAAGCCCTAAAA
CGAACCACCGATTTTTCCTGTTCTTTAATCCGGCGGAAATGGCGATTCAAAGACTAGAACTCTGCTTGGAGCTGCTGAGAATGGCCGTCAATTTCGTCGTCGTCGTTGCC
GAATCCGTCGGCGAGGTCATCCACCAGGAATCTCAGCCGCCGCAACGGCCAACGGCGAACCCTCGCGTTCCGATTCCGTTCGTCGGCTTTTACCCCTAAATCCATCCTCC
GCCGCCGTCCGCGGCGGCGATGTGGCGATGTTTGTTCAAAGTTAGCGGGTGAATTTTGTATTTTGCTTTTTGTTTTTAGTAATTAAATCGAGTTTTTTGTATTTATTTTT
TGGGAAAATAATTCTAATGGTCATTTTGTCGGGAGTTGTTGAGTTTATCAGAAATAATTCGATTAGGTCGCCACAATATTAAAAGACATAATTTTTG
Protein sequenceShow/hide protein sequence
MAIQRLELCLELLRMAVNFVVVVAESVGEVIHQESQPPQRPTANPRVPIPFVGFYP