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Tan0020338 (gene) of Snake gourd v1 genome

Gene IDTan0020338
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:71500236..71502271
RNA-Seq ExpressionTan0020338
SyntenyTan0020338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN58931.1 hypothetical protein Csa_001835 [Cucumis sativus]1.3e-1458.06Show/hide
Query:  INIDQTYSLSLSLSYISLSSGVLSLCFFIIIDVKRALQFRSPIKASAVGVAFRRRRRSFCPHKLSYFFIVLLEFCESSACSAKEGKISFKANK
        ++I+Q++  +L+ S    SS   S         K  LQFRSPIKASAV VAFRRRRR F  HKL YFFIVLLEF ESS CSAKEG  S +ANK
Subjt:  INIDQTYSLSLSLSYISLSSGVLSLCFFIIIDVKRALQFRSPIKASAVGVAFRRRRRSFCPHKLSYFFIVLLEFCESSACSAKEGKISFKANK
TrEMBL top hitse value%identityAlignment
A0A0A0LFP6 Uncharacterized protein6.3e-1558.06Show/hide
Query:  INIDQTYSLSLSLSYISLSSGVLSLCFFIIIDVKRALQFRSPIKASAVGVAFRRRRRSFCPHKLSYFFIVLLEFCESSACSAKEGKISFKANK
        ++I+Q++  +L+ S    SS   S         K  LQFRSPIKASAV VAFRRRRR F  HKL YFFIVLLEF ESS CSAKEG  S +ANK
Subjt:  INIDQTYSLSLSLSYISLSSGVLSLCFFIIIDVKRALQFRSPIKASAVGVAFRRRRRSFCPHKLSYFFIVLLEFCESSACSAKEGKISFKANK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGCTTGTGGTGTAGAAGGTCGTTTTTACACCGTAAAATGGAAATAAATAATAAAATAAATATTGATCAAACATATTCACTCTCTCTCAGTCTTTCATATATATC
TCTAAGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCATCGACGTCAAAAGAGCTTTACAATTTCGATCACCGATAAAAGCATCCGCCGTCGGAGTTGCGTTCCGGC
GTAGACGGAGAAGTTTTTGCCCTCACAAACTCTCTTATTTTTTCATCGTGCTTTTGGAATTTTGTGAGTCTTCGGCTTGCAGCGCCAAGGAGGGTAAAATCTCTTTTAAA
GCTAATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGCTTGTGGTGTAGAAGGTCGTTTTTACACCGTAAAATGGAAATAAATAATAAAATAAATATTGATCAAACATATTCACTCTCTCTCAGTCTTTCATATATATC
TCTAAGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCATCGACGTCAAAAGAGCTTTACAATTTCGATCACCGATAAAAGCATCCGCCGTCGGAGTTGCGTTCCGGC
GTAGACGGAGAAGTTTTTGCCCTCACAAACTCTCTTATTTTTTCATCGTGCTTTTGGAATTTTGTGAGTCTTCGGCTTGCAGCGCCAAGGAGGGTAAAATCTCTTTTAAA
GCTAATAAATGA
Protein sequenceShow/hide protein sequence
MKCLWCRRSFLHRKMEINNKINIDQTYSLSLSLSYISLSSGVLSLCFFIIIDVKRALQFRSPIKASAVGVAFRRRRRSFCPHKLSYFFIVLLEFCESSACSAKEGKISFK
ANK