; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020343 (gene) of Snake gourd v1 genome

Gene IDTan0020343
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG02:20710336..20710770
RNA-Seq ExpressionTan0020343
SyntenyTan0020343
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7997944.1 hypothetical protein FH972_002530 [Carpinus fangiana]3.1e-2947.86Show/hide
Query:  FGMVLAFVGGCNGQPGREV------PLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM-RNMKSHASFNVFWPE-
        F +VLA   G       E       PL  W +++ N M    LFLHCKSKDDDLG +TL V Q  SW+FKEN   TTLYWCYM ++ KSHA+ +VFW E 
Subjt:  FGMVLAFVGGCNGQPGREV------PLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM-RNMKSHASFNVFWPE-

Query:  KSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
        K+ W ++RC  +NCIW  +D+GIYL+    N  + +H WE
Subjt:  KSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]1.8e-6173.43Show/hide
Query:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP
        ME LK + + G++LA +G CNGQPG EVPLSSWK+NILN+M+K+SLF+ CKSKDDDLG + L V+QQFSW+FKENL+ TTLYWCYM N KSHASFNV+WP
Subjt:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP

Query:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
        E+SGW AFRC  RNCIWS RD+GIYLKTNTHNT+E IH WEPG
Subjt:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]2.0e-6074.83Show/hide
Query:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP
        ME LK + I  ++LA +G CNGQPG EVPLSSWKINILN+M+K++LFL CKSKDDDLG + L V+QQFSW+FKENL+ TTLYWCYM N +SHASFNVFWP
Subjt:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP

Query:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
        EKSGW AFRC  RNCIWS RD+GIYLKTN HNTFE IH WEPG
Subjt:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]2.0e-6074.83Show/hide
Query:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP
        ME LK + I  ++LA +G CNGQPG EVPLSSWKINILN+M+K++LFL CKSKDDDLG + L V+QQFSW+FKENL+ TTLYWCYM N +SHASFNVFWP
Subjt:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP

Query:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
        EKSGW AFRC  RNCIWS RD+GIYLKTN HNTFE IH WEPG
Subjt:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]1.8e-6173.43Show/hide
Query:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP
        ME LK + + G++LA +G CNGQPG EVPLSSWK+NILN+M+K+SLF+ CKSKDDDLG + L V+QQFSW+FKENL+ TTLYWCYM N KSHASFNV+WP
Subjt:  METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWP

Query:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
        E+SGW AFRC  RNCIWS RD+GIYLKTNTHNT+E IH WEPG
Subjt:  EKSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

TrEMBL top hitse value%identityAlignment
A0A251N118 S-protein homolog2.4e-2745.8Show/hide
Query:  VLAFVGGCNGQPGREVPLSSWKINILNDM-SKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC
        +LA    C G PG  +  + W ++++N++ + ++LF HCKSKDDDLGER L    +F+W+FKEN F TTLYWCYM   + HA+ +VFW E    W  +RC
Subjt:  VLAFVGGCNGQPGREVPLSSWKINILNDM-SKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC

Query:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
          ++CIW  +D+GIY+K    N  E  H WE
Subjt:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

A0A5E4EJG4 S-protein homolog5.4e-2745.8Show/hide
Query:  VLAFVGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC
        +LA    C G P   +  ++W ++++N++S  ++LF HCKSKDDDLGER L    +F+W+FKEN F TTLYWCYM   + HA+ +VFW E    W  +RC
Subjt:  VLAFVGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC

Query:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
          ++CIW  +D+GIY+K    N  E  H WE
Subjt:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

A0A5N6QHU0 S-protein homolog1.5e-2947.86Show/hide
Query:  FGMVLAFVGGCNGQPGREV------PLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM-RNMKSHASFNVFWPE-
        F +VLA   G       E       PL  W +++ N M    LFLHCKSKDDDLG +TL V Q  SW+FKEN   TTLYWCYM ++ KSHA+ +VFW E 
Subjt:  FGMVLAFVGGCNGQPGREV------PLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM-RNMKSHASFNVFWPE-

Query:  KSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
        K+ W ++RC  +NCIW  +D+GIYL+    N  + +H WE
Subjt:  KSGWFAFRCP-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

A0A6J1ESA0 S-protein homolog1.6e-2645.04Show/hide
Query:  MVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC
        +V+  +G      G  VP  SW++ I+ND SK  L +HCKS DDDLG   + V   + W FK NL+ +T +WC   +   H SF+VFWPE  S W   RC
Subjt:  MVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC

Query:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
           +CIW  +D GIYLK +  NTFE IH W+
Subjt:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

M5VWE5 S-protein homolog (Fragment)2.4e-2745.8Show/hide
Query:  VLAFVGGCNGQPGREVPLSSWKINILNDM-SKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC
        +LA    C G PG  +  + W ++++N++ + ++LF HCKSKDDDLGER L    +F+W+FKEN F TTLYWCYM   + HA+ +VFW E    W  +RC
Subjt:  VLAFVGGCNGQPGREVPLSSWKINILNDM-SKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-KSGWFAFRC

Query:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE
          ++CIW  +D+GIY+K    N  E  H WE
Subjt:  P-RNCIWSVRDNGIYLKTNTHNTFERIHNWE

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 25.2e-1131.86Show/hide
Query:  PLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRN-CIWSVRDNGIYLK
        P S   + I ND+  + +L  HCKSKDDDLG RTL   + +S++F    F  TLY+C         SF+++   +      +C  + C+W +R NG    
Subjt:  PLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRN-CIWSVRDNGIYLK

Query:  TNTHNTFERIHNW
         +    F+  + W
Subjt:  TNTHNTFERIHNW

F4JLS0 S-protein homolog 13.1e-2438.64Show/hide
Query:  VGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-----KSGWFAFRC
        VGG   +      +S W++ ++N ++  E+LF+HCKSK+DDLGE  L  R +FSWNF EN+ H+T +WCYM     H + NVFW +     + GW     
Subjt:  VGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-----KSGWFAFRC

Query:  PRNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
         +NCIW+ + +G+YL  +          WE G
Subjt:  PRNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

P0DN93 S-protein homolog 291.7e-0927.78Show/hide
Query:  KCLGIFGMVLAFV-GGCNGQPGREVPLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEK
        K   +  ++L +V   C+G      P +   + + N++S + +L + C+SKDDDLGE  L   Q F W F+ + F TTL+ C              W   
Subjt:  KCLGIFGMVLAFV-GGCNGQPGREVPLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEK

Query:  SGWF-AFRCPR------NCIWSVRDNGIYLKTNTHNTFERIHNW
          WF  +R  R      +C WS+  +   +  N +  F+R + W
Subjt:  SGWF-AFRCPR------NCIWSVRDNGIYLKTNTHNTFERIHNW

Q2HQ46 S-protein homolog 741.2e-2037.39Show/hide
Query:  LSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCP-RNCIWSVRDNGIYLKT
        +S W++ + N ++  E+LF+HCKSK++DLG+  L    +FSWNF EN+ H+TL+WCYM     H +  VFW +       RC  +NC+W+ +++G+YL  
Subjt:  LSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCP-RNCIWSVRDNGIYLKT

Query:  NTHNTFERIHNWEPG
        +          W+ G
Subjt:  NTHNTFERIHNWEPG

Q40975 Self-incompatibility protein S11.1e-0827.62Show/hide
Query:  KINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNT
        ++ I+N      S+ +HC+SKD+DL  +T+      S++F+E+ FHTT ++C ++       F  +  +       RC   C+W + D+G+Y     H  
Subjt:  KINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNT

Query:  FERIH
        ++  H
Subjt:  FERIH

Arabidopsis top hitse value%identityAlignment
AT1G28306.1 Plant self-incompatibility protein S1 family8.2e-1229.58Show/hide
Query:  LKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKE----SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFW
        L  L ++G+ +  V G           ++ KINI ND+       +LF+HCKSK  D G + LP  + + +  KE     TL+WC +R+   +     F 
Subjt:  LKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKE----SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFW

Query:  PEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNTFERIHNWEP
          K  +       +  W  R++GIY + N   T  ++HNW+P
Subjt:  PEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNTFERIHNWEP

AT4G16195.1 Plant self-incompatibility protein S1 family3.7e-1231.86Show/hide
Query:  PLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRN-CIWSVRDNGIYLK
        P S   + I ND+  + +L  HCKSKDDDLG RTL   + +S++F    F  TLY+C         SF+++   +      +C  + C+W +R NG    
Subjt:  PLSSWKINILNDMSKE-SLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCPRN-CIWSVRDNGIYLK

Query:  TNTHNTFERIHNW
         +    F+  + W
Subjt:  TNTHNTFERIHNW

AT4G16295.1 S-protein homologue 12.2e-2538.64Show/hide
Query:  VGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-----KSGWFAFRC
        VGG   +      +S W++ ++N ++  E+LF+HCKSK+DDLGE  L  R +FSWNF EN+ H+T +WCYM     H + NVFW +     + GW     
Subjt:  VGGCNGQPGREVPLSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPE-----KSGWFAFRC

Query:  PRNCIWSVRDNGIYLKTNTHNTFERIHNWEPG
         +NCIW+ + +G+YL  +          WE G
Subjt:  PRNCIWSVRDNGIYLKTNTHNTFERIHNWEPG

AT4G29035.1 Plant self-incompatibility protein S1 family8.8e-2237.39Show/hide
Query:  LSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCP-RNCIWSVRDNGIYLKT
        +S W++ + N ++  E+LF+HCKSK++DLG+  L    +FSWNF EN+ H+TL+WCYM     H +  VFW +       RC  +NC+W+ +++G+YL  
Subjt:  LSSWKINILNDMSK-ESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRCP-RNCIWSVRDNGIYLKT

Query:  NTHNTFERIHNWEPG
        +          W+ G
Subjt:  NTHNTFERIHNWEPG

AT5G04347.1 Plant self-incompatibility protein S1 family9.1e-1131.13Show/hide
Query:  ILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM---RNMKSHASFNVFWPEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNTF
        + N+++ + L + C+SKDD+LG+  L V Q    NF +N++  TL+WC +    + K H +F+ +   +S W A   PR  +W  R++GIY   +     
Subjt:  ILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYM---RNMKSHASFNVFWPEKSGWFAFRCPRNCIWSVRDNGIYLKTNTHNTF

Query:  ERIHNW
        ++ ++W
Subjt:  ERIHNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCTCAAGTGTTTAGGGATTTTTGGTATGGTTTTAGCATTTGTTGGAGGATGCAACGGGCAGCCAGGCAGAGAGGTTCCATTAAGTTCATGGAAAATTAACAT
TTTGAATGACATGAGCAAAGAATCTTTGTTTCTTCATTGCAAGTCTAAAGATGATGATCTAGGCGAGCGAACCCTACCAGTGAGACAACAGTTTTCTTGGAATTTTAAGG
AGAATTTGTTTCATACAACACTCTATTGGTGCTACATGCGAAATATGAAGAGTCATGCTTCGTTTAATGTGTTTTGGCCAGAGAAATCCGGTTGGTTTGCTTTCAGATGT
CCGCGAAATTGCATTTGGTCTGTTCGAGATAATGGAATTTACTTAAAGACAAACACCCATAATACATTTGAGCGCATACATAACTGGGAACCTGGGACGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCTCAAGTGTTTAGGGATTTTTGGTATGGTTTTAGCATTTGTTGGAGGATGCAACGGGCAGCCAGGCAGAGAGGTTCCATTAAGTTCATGGAAAATTAACAT
TTTGAATGACATGAGCAAAGAATCTTTGTTTCTTCATTGCAAGTCTAAAGATGATGATCTAGGCGAGCGAACCCTACCAGTGAGACAACAGTTTTCTTGGAATTTTAAGG
AGAATTTGTTTCATACAACACTCTATTGGTGCTACATGCGAAATATGAAGAGTCATGCTTCGTTTAATGTGTTTTGGCCAGAGAAATCCGGTTGGTTTGCTTTCAGATGT
CCGCGAAATTGCATTTGGTCTGTTCGAGATAATGGAATTTACTTAAAGACAAACACCCATAATACATTTGAGCGCATACATAACTGGGAACCTGGGACGATGTAA
Protein sequenceShow/hide protein sequence
METLKCLGIFGMVLAFVGGCNGQPGREVPLSSWKINILNDMSKESLFLHCKSKDDDLGERTLPVRQQFSWNFKENLFHTTLYWCYMRNMKSHASFNVFWPEKSGWFAFRC
PRNCIWSVRDNGIYLKTNTHNTFERIHNWEPGTM