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Tan0020351 (gene) of Snake gourd v1 genome

Gene IDTan0020351
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal protein S1
Genome locationLG05:61497815..61500125
RNA-Seq ExpressionTan0020351
SyntenyTan0020351
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCB20452.1 ribosomal protein S1 [Actinidia chinensis]5.1e-9396.74Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

XP_022974554.1 uncharacterized protein LOC111473236 [Cucurbita maxima]2.1e-9497.83Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_003587379.2 ribosomal protein S1 [Cucurbita pepo]8.7e-9396.2Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        LRSGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVG LDLVAGESLIKE ILERFFIDLVAGESLIKERAAA FNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLF+LPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPK TNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]2.1e-9497.83Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009913648.1 ribosomal protein S1 [Luffa acutangula]3.0e-9398.37Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

TrEMBL top hitse value%identityAlignment
A0A4D6FU87 Ribosomal protein S12.5e-9396.74Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J5C9 Ribosomal protein S12.5e-9396.74Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A5C2I386 Ribosomal protein S11.0e-9497.83Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A6J1IHY3 uncharacterized protein LOC1114732361.0e-9497.83Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A7D5Y132 Ribosomal protein S11.5e-9398.37Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

SwissProt top hitse value%identityAlignment
P0AG69 30S ribosomal protein S11.2e-0425.52Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        R G+ ++  V+ + +++ LVDAG       ++ E + +P   A +F+N  G L++  G+ + +    +E  F     GE+L+    A R           
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV
                      + AW+ L K ++    V G I  KVKGG++V + G   FLP   L+  R   D          F +  ++ KR N+VV
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV

P26863 Ribosomal protein S1, mitochondrial4.3e-1834.92Show/hide
Query:  GNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDV-VAG
        G+A+Q  V++L++   LVD G  TP IC Q E   VPI + ARF                                               G  DV V G
Subjt:  GNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDV-VAG

Query:  EPLFLLPR----RFRQNRAWMELNKIWQTNTK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV
        EP  LLP+    + ++   W+EL KIW+++   VKGFI+  VKGGY+VAIAG+I FLP   L S+++   +   F+I ++ PK +NIVV
Subjt:  EPLFLLPR----RFRQNRAWMELNKIWQTNTK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV

P37985 30S ribosomal protein S17.1e-0524.48Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        R G+ ++  V+ + +++ LVDAG       ++ E + +P+    +F+N  G +++  G+ + +    +E  F     GE+L+    A R           
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV
                      + AW+ L K ++ +  V G I  KVKGG++V + G   FLP   L+  R   D          F +  ++ KR N+VV
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV

P57395 30S ribosomal protein S15.4e-0524.61Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV
        R G+ ++  ++ + ++M LVDAG       ++ E + +P+    +F+N  G LD+  G+ + +    +E  F     GE+L+    A R           
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFL--------PFRPLISQRISNDRFTIESINPKRTNIVV
                      + AW+ L K  + +  V G I  KVKGG++V +     FL        P R  I        F +  ++ KR N+VV
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFL--------PFRPLISQRISNDRFTIESINPKRTNIVV

Q6NDP1 30S ribosomal protein S19.3e-0536.71Show/hide
Query:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV
        R+  +W +L K +Q N KV G I  +VKGG++V + G + FLP      RP+  ++  ++N + F I  ++ +R NIVV
Subjt:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCTTCGCCCTACAGCTAGTGGAGACACCGACTAATAAGATTGACGACAGGAGAACACATGTCCTTAAGGCTAGTGTAACGGAGGGCTTCCTCGCAAGAAGCTT
TATAGTCAGGGCTGCTTGTTTGCCTTTCTTCTTTCTTTTCCGTACGTTAGGGTCGTTCGGGCGGAAAACCGAGTTGCGTACTGGCGCTCAAGCACCCAACCTATACAGGG
GGCTTGGGGCTCGAAAGCAGCGAAAAAAGTCGAGCTGTGAAATCGGTGTGGTGAGGTATTGGAAGTGTTCAGCGAATCGAGAGAAAGACAACCAAGAGGACCCTGATGTA
GTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCACACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGA
AATGTTCTTGGTGGATGCTGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCC
TGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCAGCCGCCAGGTTT
AATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAC
GAATACAAAGGTCAAAGGCTTTATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGA
TATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGCTTCGCCCTACAGCTAGTGGAGACACCGACTAATAAGATTGACGACAGGAGAACACATGTCCTTAAGGCTAGTGTAACGGAGGGCTTCCTCGCAAGAAGCTT
TATAGTCAGGGCTGCTTGTTTGCCTTTCTTCTTTCTTTTCCGTACGTTAGGGTCGTTCGGGCGGAAAACCGAGTTGCGTACTGGCGCTCAAGCACCCAACCTATACAGGG
GGCTTGGGGCTCGAAAGCAGCGAAAAAAGTCGAGCTGTGAAATCGGTGTGGTGAGGTATTGGAAGTGTTCAGCGAATCGAGAGAAAGACAACCAAGAGGACCCTGATGTA
GTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCACACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGA
AATGTTCTTGGTGGATGCTGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCC
TGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCAGCCGCCAGGTTT
AATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAAC
GAATACAAAGGTCAAAGGCTTTATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGA
TATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA
Protein sequenceShow/hide protein sequence
MPCFALQLVETPTNKIDDRRTHVLKASVTEGFLARSFIVRAACLPFFFLFRTLGSFGRKTELRTGAQAPNLYRGLGARKQRKKSSCEIGVVRYWKCSANREKDNQEDPDV
VRFVYEELQRAATLGAYDEALRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARF
NDLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF