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Tan0020400 (gene) of Snake gourd v1 genome

Gene IDTan0020400
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG07:73007188..73007598
RNA-Seq ExpressionTan0020400
SyntenyTan0020400
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026247.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]6.1e-2749.53Show/hide
Query:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT
        ++N  S + L  HC+S+DDDLG  H+   GD+Y W F+ENFWQ+T FWC    QN  ++F+ FWPE +S+WL D C + G C W AKDDG YL+N   N 
Subjt:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
         + VH+W
Subjt:  YDLVHRW

XP_015892179.1 S-protein homolog 1-like [Ziziphus jujuba]3.6e-2748.25Show/hide
Query:  PCYSWRVIILNNQSTSL-LQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL
        P Y + + I+N  S+   L  HC+S+DDDLG H L  G ++ W FR NFW +TRFWC     N    FDVFWPE R  WL   C +  C W AKDDGFYL
Subjt:  PCYSWRVIILNNQSTSL-LQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL

Query:  KNDSLNTYDLVHRW
        +N  +N  +L+H+W
Subjt:  KNDSLNTYDLVHRW

XP_022931007.1 S-protein homolog 1-like [Cucurbita moschata]8.0e-4357.89Show/hide
Query:  LALWVVFVLSSMN-------PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLV
        +AL V+F L  +        P  SWRV+I+N+QS + L  HCKS DDDLG HI++V D+Y+WKF+ N W STRFWCTF SQNG L+FDVFWPEG S+WL+
Subjt:  LALWVVFVLSSMN-------PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLV

Query:  DHCVFGDCTWVAKDDGFYLKNDSLNTYDLVHRW
        + C +G C WVAKD+G YLKND  NT++L+H+W
Subjt:  DHCVFGDCTWVAKDDGFYLKNDSLNTYDLVHRW

XP_023542206.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.0e-2649.09Show/hide
Query:  SWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS
        +W V I+N+   S L AHCKS+ DDLG H+++ GD Y WKF EN WQ+T +WC F S+ G+ +  VFWPE +S WL D C    C WVAKDDG  ++   
Subjt:  SWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS

Query:  LNTYDLVHRW
           Y+LV+ W
Subjt:  LNTYDLVHRW

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]1.6e-2749.12Show/hide
Query:  PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILR-VGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL
        P  +W+V I+N Q  + L+ HCKS+DDDLGVH+++  G++YNW F+ENF Q+TRFWC F S+ G  +F+VFWPE   +WL D C   +C WVA + GF L
Subjt:  PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILR-VGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL

Query:  KNDSLNTYDLVHRW
         N    T +  H W
Subjt:  KNDSLNTYDLVHRW

TrEMBL top hitse value%identityAlignment
A0A1S3C8C8 S-protein homolog6.6e-2749.53Show/hide
Query:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT
        ++N  S + L  HC+S+DDDLG  H+   GD+Y W F+ENFWQ+T FWC    QN  ++F+ FWPE +S+WL D C + G C W AKDDG YL+N   N 
Subjt:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
         + VH+W
Subjt:  YDLVHRW

A0A5A7SNG3 S-protein homolog3.0e-2749.53Show/hide
Query:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT
        ++N  S + L  HC+S+DDDLG  H+   GD+Y W F+ENFWQ+T FWC    QN  ++F+ FWPE +S+WL D C + G C W AKDDG YL+N   N 
Subjt:  ILNNQSTSLLQAHCKSRDDDLGV-HILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVF-GDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
         + VH+W
Subjt:  YDLVHRW

A0A5A7UB41 S-protein homolog8.7e-2747.46Show/hide
Query:  SMNPCYSWRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGR-LTFDVFWPEGRSSWLVDHCVFGDCTWVAKDD
        +M P  SW+V++ N  S    L  HCKS+D+DLG H LRVG+ ++WKF+EN + +TRFWC+  S + + +T DVFWPE R  WL   C +  C WVA+DD
Subjt:  SMNPCYSWRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGR-LTFDVFWPEGRSSWLVDHCVFGDCTWVAKDD

Query:  GFYLKNDSLNTYDLVHRW
        G Y+ N S N  + V +W
Subjt:  GFYLKNDSLNTYDLVHRW

A0A6J1ESA0 S-protein homolog3.9e-4357.89Show/hide
Query:  LALWVVFVLSSMN-------PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLV
        +AL V+F L  +        P  SWRV+I+N+QS + L  HCKS DDDLG HI++V D+Y+WKF+ N W STRFWCTF SQNG L+FDVFWPEG S+WL+
Subjt:  LALWVVFVLSSMN-------PCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLV

Query:  DHCVFGDCTWVAKDDGFYLKNDSLNTYDLVHRW
        + C +G C WVAKD+G YLKND  NT++L+H+W
Subjt:  DHCVFGDCTWVAKDDGFYLKNDSLNTYDLVHRW

A0A6P4ABD6 S-protein homolog1.7e-2748.25Show/hide
Query:  PCYSWRVIILNNQSTSL-LQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL
        P Y + + I+N  S+   L  HC+S+DDDLG H L  G ++ W FR NFW +TRFWC     N    FDVFWPE R  WL   C +  C W AKDDGFYL
Subjt:  PCYSWRVIILNNQSTSL-LQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYL

Query:  KNDSLNTYDLVHRW
        +N  +N  +L+H+W
Subjt:  KNDSLNTYDLVHRW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.4e-1337.38Show/hide
Query:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRL-TFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT
        +++ N +  LL  HCKSRDDD G HIL+ G  Y W F  NF  ST ++C F  +  +   FD++     SS     C   +CTW AK+DG Y   +    
Subjt:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRL-TFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
          L ++W
Subjt:  YDLVHRW

F4JLS0 S-protein homolog 12.3e-1637.27Show/hide
Query:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS
        W+V ++N  +T   L  HCKS++DDLG   L+  + ++W F EN   ST FWC     NG +  +VFW +     L   C + +C W AK DG YL N +
Subjt:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS

Query:  LNTYDLVHRW
             L  +W
Subjt:  LNTYDLVHRW

P0DN92 S-protein homolog 242.0e-1237.96Show/hide
Query:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFY-LKNDSLN
        + + N +  LL  HCKSRDDDLG HIL  G+ + WKF  NF  ST ++C F   Q  +  F+++    R++     C   +CTW A+ DG Y    D + 
Subjt:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFY-LKNDSLN

Query:  TYDLVHRW
         Y L + W
Subjt:  TYDLVHRW

Q2HQ46 S-protein homolog 745.1e-1636.36Show/hide
Query:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS
        W+V + N  +T   L  HCKS+++DLG   L+  D ++W F EN   ST FWC     +G +   VFW +     L   C + +C W AK+DG YL N +
Subjt:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS

Query:  LNTYDLVHRW
        +    L  +W
Subjt:  LNTYDLVHRW

Q9FI84 S-protein homolog 272.6e-1237.38Show/hide
Query:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT
        I + N +  LL  HCKS+DDDLG HI + G+ Y WKF  NF  ST ++C F   Q+ +  FD+   E       D     +CTW AK D  Y  ++   T
Subjt:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
             +W
Subjt:  YDLVHRW

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 11.6e-1737.27Show/hide
Query:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS
        W+V ++N  +T   L  HCKS++DDLG   L+  + ++W F EN   ST FWC     NG +  +VFW +     L   C + +C W AK DG YL N +
Subjt:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS

Query:  LNTYDLVHRW
             L  +W
Subjt:  LNTYDLVHRW

AT4G29035.1 Plant self-incompatibility protein S1 family3.6e-1736.36Show/hide
Query:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS
        W+V + N  +T   L  HCKS+++DLG   L+  D ++W F EN   ST FWC     +G +   VFW +     L   C + +C W AK+DG YL N +
Subjt:  WRVIILNNQST-SLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDS

Query:  LNTYDLVHRW
        +    L  +W
Subjt:  LNTYDLVHRW

AT5G04350.1 Plant self-incompatibility protein S1 family7.5e-1534.34Show/hide
Query:  IILNNQ--STSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSL
        ++L+NQ   + LL+ HC+S+DDDLG HIL++G +Y + F +N WQ+T F C  + Q       + +    +SW     +   C W+ ++DG Y   D +
Subjt:  IILNNQ--STSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSL

AT5G06020.1 Plant self-incompatibility protein S1 family1.8e-1337.38Show/hide
Query:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT
        I + N +  LL  HCKS+DDDLG HI + G+ Y WKF  NF  ST ++C F   Q+ +  FD+   E       D     +CTW AK D  Y  ++   T
Subjt:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTF-VSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNT

Query:  YDLVHRW
             +W
Subjt:  YDLVHRW

AT5G06030.1 Plant self-incompatibility protein S1 family3.2e-1335.85Show/hide
Query:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNTY
        + + N +  LL  HCKSRDDDLG HIL  G+ + WKF  NF  ST  +C F  +       + +   R     D     +CTW A+ DGF+   D     
Subjt:  IILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCTWVAKDDGFYLKNDSLNTY

Query:  DLVHRW
         L + W
Subjt:  DLVHRW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCCAAAAGGGTTTGAGTTTGGCTTTGTGGGTTGTTTTTGTTTTAAGCTCCATGAATCCATGTTATTCATGGAGGGTGATCATTTTAAATAACCAATCAACTTC
TCTTCTTCAGGCTCATTGTAAGTCTCGTGATGATGATTTAGGAGTACACATTCTAAGAGTTGGAGACAACTACAATTGGAAATTCAGAGAGAATTTTTGGCAATCCACTC
GTTTTTGGTGCACTTTTGTTAGCCAAAATGGTCGCTTGACCTTTGATGTGTTTTGGCCTGAGGGGCGCAGTTCTTGGCTTGTAGACCATTGTGTCTTTGGTGATTGCACT
TGGGTTGCAAAAGATGATGGATTTTACTTGAAGAATGACTCTCTAAATACCTATGATCTCGTTCATAGGTGGTCTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGCCAAAAGGGTTTGAGTTTGGCTTTGTGGGTTGTTTTTGTTTTAAGCTCCATGAATCCATGTTATTCATGGAGGGTGATCATTTTAAATAACCAATCAACTTC
TCTTCTTCAGGCTCATTGTAAGTCTCGTGATGATGATTTAGGAGTACACATTCTAAGAGTTGGAGACAACTACAATTGGAAATTCAGAGAGAATTTTTGGCAATCCACTC
GTTTTTGGTGCACTTTTGTTAGCCAAAATGGTCGCTTGACCTTTGATGTGTTTTGGCCTGAGGGGCGCAGTTCTTGGCTTGTAGACCATTGTGTCTTTGGTGATTGCACT
TGGGTTGCAAAAGATGATGGATTTTACTTGAAGAATGACTCTCTAAATACCTATGATCTCGTTCATAGGTGGTCTGGCTAA
Protein sequenceShow/hide protein sequence
MKGQKGLSLALWVVFVLSSMNPCYSWRVIILNNQSTSLLQAHCKSRDDDLGVHILRVGDNYNWKFRENFWQSTRFWCTFVSQNGRLTFDVFWPEGRSSWLVDHCVFGDCT
WVAKDDGFYLKNDSLNTYDLVHRWSG