; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020433 (gene) of Snake gourd v1 genome

Gene IDTan0020433
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin-regulated family protein
Genome locationLG07:12409140..12411750
RNA-Seq ExpressionTan0020433
SyntenyTan0020433
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009337038.1 PREDICTED: protein GAST1-like [Pyrus x bretschneideri]1.4e-2960.91Show/hide
Query:  SFFFLWLALMFLFLAHNQHRNTGD-SVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNW
        S F L +AL+ +FL  NQ  +T + S  +  R+   QP    Q       +C  RCT+RCSATAYKKPC+ FC+KCCAKCLCVPPGTYGNKQ+CPCYNNW
Subjt:  SFFFLWLALMFLFLAHNQHRNTGD-SVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNW

Query:  KTKRGGPKCP
        KTKRGGPKCP
Subjt:  KTKRGGPKCP

XP_022153040.1 protein GAST1-like [Momordica charantia]2.6e-3159.65Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M++ISS   L L LMFLF  HNQ  ++ ++   +   +     + +        +CGGRCT RCSATA+KKPCM FC+KCCA CLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

XP_022944307.1 gibberellin-regulated protein 5-like [Cucurbita moschata]2.0e-3161.4Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M+T+S+F  L LA M L   H Q   + ++ V + + +     S R        +CGGRCT RCSAT++KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

XP_022985831.1 protein GAST1-like [Cucurbita maxima]6.9e-3262.28Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M+T+S+F  L LALM L   H Q   + ++ V + + +     S R        +CGGRCT RCSAT++KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

XP_023511912.1 protein GAST1-like [Cucurbita pepo subsp. pepo]4.5e-3161.4Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M+T+S+F  L  ALM L   H Q   + ++ V + + +     S R        +CGGRCT RCSAT++KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A068UJT1 Uncharacterized protein2.7e-2961.26Show/hide
Query:  FFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNF----QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNN
        F L LA + L LA NQ  + G S    + +H+ +  +ARQ           +CG RC TRCS TAYKKPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNN
Subjt:  FFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNF----QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNN

Query:  WKTKRGGPKCP
        WKTKRGGPKCP
Subjt:  WKTKRGGPKCP

A0A6J1DFN7 protein GAST1-like1.3e-3159.65Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M++ISS   L L LMFLF  HNQ  ++ ++   +   +     + +        +CGGRCT RCSATA+KKPCM FC+KCCA CLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

A0A6J1FVD8 gibberellin-regulated protein 5-like9.8e-3261.4Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M+T+S+F  L LA M L   H Q   + ++ V + + +     S R        +CGGRCT RCSAT++KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

A0A6J1J9B2 protein GAST1-like3.4e-3262.28Show/hide
Query:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        M+T+S+F  L LALM L   H Q   + ++ V + + +     S R        +CGGRCT RCSAT++KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
Subjt:  MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

A0A6P6TQ32 protein GAST1-like1.2e-2962.16Show/hide
Query:  FFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNF----QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNN
        F L LA + L LA NQ  + G S    V +H+ +  +ARQ           +CG RC TRCS TAYKKPCM+FC+KCCAKCLCVPPGTYGNKQ+CPCYNN
Subjt:  FFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNF----QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNN

Query:  WKTKRGGPKCP
        WKTKRGGPKCP
Subjt:  WKTKRGGPKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 137.0e-2772.06Show/hide
Query:  QAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        ++  P   +CG RC  RCS T YKKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK GGPKCP
Subjt:  QAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

P27057 Protein GAST11.6e-2683.05Show/hide
Query:  CGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        C  +CT RCS T+YKKPCM FC+KCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Subjt:  CGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

P47926 Protein RSI-17.2e-2455.66Show/hide
Query:  FLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
        FL L  MFL L       T  +VVE   + R           PT+  C  RCT RCSAT++KKPCM FC+KCCA CLCVP G YGNKQ CPCYNNWKT+ 
Subjt:  FLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR

Query:  GGPKCP
        G PKCP
Subjt:  GGPKCP

Q6NMQ7 Gibberellin-regulated protein 69.7e-2980.65Show/hide
Query:  NFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        ++QCGG+CT RCS T Y KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Subjt:  NFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Q84J95 Gibberellin-regulated protein 53.8e-2576.67Show/hide
Query:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        QC  +C+ RCSAT++KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK G PKCP
Subjt:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein6.9e-3080.65Show/hide
Query:  NFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        ++QCGG+CT RCS T Y KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Subjt:  NFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

AT2G30810.1 Gibberellin-regulated family protein4.8e-2368.33Show/hide
Query:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        +C   C  RCSAT+++KPC+ FC KCC KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Subjt:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

AT3G02885.1 GAST1 protein homolog 52.7e-2676.67Show/hide
Query:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        QC  +C+ RCSAT++KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK G PKCP
Subjt:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

AT3G10185.1 Gibberellin-regulated family protein5.0e-2872.06Show/hide
Query:  QAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        ++  P   +CG RC  RCS T YKKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK GGPKCP
Subjt:  QAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

AT5G15230.1 GAST1 protein homolog 41.1e-2268.33Show/hide
Query:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        QC   C  RC  T Y K C+ FC KCC KCLCVPPG YGNKQ+C CYNNWKT+ GGPKCP
Subjt:  QCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACCATTTCCAGCTTCTTCTTCCTATGGCTCGCCCTCATGTTTCTTTTCCTCGCACACAATCAGCATCGGAACACCGGCGACAGCGTCGTGGAAGCTGTACGGCG
CCACCGAAGGCAGCCTCCGTCCGCAAGGCAAGCCAAATTCCCCACAAATTTTCAATGCGGAGGGCGGTGCACGACGCGGTGTTCGGCGACGGCGTACAAGAAGCCGTGTA
TGGTATTCTGCAGAAAGTGCTGCGCGAAGTGCTTGTGCGTTCCGCCAGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACTAAGCGCGGTGGC
CCTAAATGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACCATTTCCAGCTTCTTCTTCCTATGGCTCGCCCTCATGTTTCTTTTCCTCGCACACAATCAGCATCGGAACACCGGCGACAGCGTCGTGGAAGCTGTACGGCG
CCACCGAAGGCAGCCTCCGTCCGCAAGGCAAGCCAAATTCCCCACAAATTTTCAATGCGGAGGGCGGTGCACGACGCGGTGTTCGGCGACGGCGTACAAGAAGCCGTGTA
TGGTATTCTGCAGAAAGTGCTGCGCGAAGTGCTTGTGCGTTCCGCCAGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACTAAGCGCGGTGGC
CCTAAATGCCCTTAA
Protein sequenceShow/hide protein sequence
MSTISSFFFLWLALMFLFLAHNQHRNTGDSVVEAVRRHRRQPPSARQAKFPTNFQCGGRCTTRCSATAYKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG
PKCP