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Tan0020434 (gene) of Snake gourd v1 genome

Gene IDTan0020434
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationLG03:42474521..42484096
RNA-Seq ExpressionTan0020434
SyntenyTan0020434
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR018957 - Zinc finger, C3HC4 RING-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595650.1 hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2453.57Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPL---SYVTQLLSSFNIRAAA
        MS  TS PI+YR+Y Y++  AASG  EQPYQ+LQ++LRY RR I VSP   V+   L ET     +N LF L L+ L DP+    YV QLLS  N+R+  
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPL---SYVTQLLSSFNIRAAA

Query:  CEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRL-AWME
         EVIA  I SY + +AGG RET+FH V E+DYIRL  WME
Subjt:  CEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRL-AWME

KAG6603237.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2551.85Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A STPI+YRLY        +  Q + ++ L+VR+R   RLI  S    V PQIL ET  TP  +ALF+LSLR+L DPL ++ +LLS+ +I AAACEV
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM
        I   IAS I Q++ G RET+FHIV EVD+I+  WM
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM

KAG6603243.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2551.85Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A STPI+YRLY        +  Q + ++ L+VR+R   RLI  S    V PQIL ET  TP  +ALF+LSLR+L DPL ++ +LLS+ +I AAACEV
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM
        I   IAS I Q++ G RET+FHIV EVD+I+  WM
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM

XP_023518048.1 uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo]3.0e-2452.86Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPL---SYVTQLLSSFNIRAAA
        MS  TS PI+YR+Y Y++  AASG  EQPYQ+LQ++L Y+RR I VSP   V+   L ET     +N LF L L+ L DP+    YV QLLS  N+R+ A
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPL---SYVTQLLSSFNIRAAA

Query:  CEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRL-AWME
        CE IA  I SY I +AGG RET+FH V ++D+IRL  WME
Subjt:  CEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRL-AWME

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]1.3e-2431.53Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A STPI+YRLY   +G            +L+V+  Y  R+I VSP     P+IL ET   P  NALF LSL +LQ+PL Y++Q LSS NI  AACE+
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAASVWMNSMPSVRRVSRVIYGLTNQILRESEVTARNDAVLRYSFRQLHDP
        +A  IASYI ++    RE+NF I+AEVD+ R+ WME            ET   V+  + P  R V +V      ++  + E               L D 
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAASVWMNSMPSVRRVSRVIYGLTNQILRESEVTARNDAVLRYSFRQLHDP

Query:  KFCFFVKQYLSELHVPAAPCEVIAQKFTSLITQMAAKNRDTNFHIFIEIDFIRVAKMEPIPGVLELTAHGRRNIGSDGALLISCGHVYHLSCIVTSLNIN
          C                           + +++ + R+                                       + I CGHVYH SC+   L  N
Subjt:  KFCFFVKQYLSELHVPAAPCEVIAQKFTSLITQMAAKNRDTNFHIFIEIDFIRVAKMEPIPGVLELTAHGRRNIGSDGALLISCGHVYHLSCIVTSLNIN

Query:  GNYTCPLCRAPLPL
           +CPLCR PLPL
Subjt:  GNYTCPLCRAPLPL

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein6.1e-2348.15Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A S PI+YRL  Y++G   +G       +LQV + +++++I VSP      ++L +T   P  NALF LSLR+LQ PL Y+TQ+LSS NIR AA + 
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM
        +A  IAS+I+Q+     ETNFHI+AEVD+IRL W+
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM

A0A0A0K696 RING-type domain-containing protein6.1e-2348.15Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A S PI+YRL  Y++G   +G       +LQV + +++++I VSP      ++L +T   P  NALF LSLR+LQ PL Y+TQ+LSS NIR AA + 
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM
        +A  IAS+I+Q+     ETNFHI+AEVD+IRL W+
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWM

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like1.1e-2142.26Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A S PI+YRL  Y +G   +G       IL+VR+ +  ++I +SP      QIL +T   P  NAL  L+LR+LQ PL Y+TQ LSS NIR AA + 
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAAS----VWMNSMPSVRR
        +A  IAS+I+Q+     + NFHI+AEVD+IR+ W+E       LEE+S  A +    V+  + P+++R
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAAS----VWMNSMPSVRR

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein1.1e-2142.26Show/hide
Query:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV
        MS A S PI+YRL  Y +G   +G       IL+VR+ +  ++I +SP      QIL +T   P  NAL  L+LR+LQ PL Y+TQ LSS NIR AA + 
Subjt:  MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEV

Query:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAAS----VWMNSMPSVRR
        +A  IAS+I+Q+     + NFHI+AEVD+IR+ W+E       LEE+S  A +    V+  + P+++R
Subjt:  IAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAAS----VWMNSMPSVRR

A0A6J1EKL4 E3 ubiquitin-protein ligase arkadia-like9.7e-2131.79Show/hide
Query:  LRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWME
        +R   RLI  S    V PQIL ET  TP  +ALF+LSLR+L DPL ++ +LLS+ +I AAACEVI   IAS I Q++ G RET+FHIV EVD+I+  WM 
Subjt:  LRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEVIAPDIASYIIQIAGGKRETNFHIVAEVDYIRLAWME

Query:  PTP--RRENLEEESETAASVWMNSMPSVRRVSRVIYGLTNQILRESEVTARNDAVLRYSFRQLHDPKFCFFVKQYLSELHVPAAPCEVIAQKFTSLITQM
             R+           +V ++ +P+ RR  R   G+  ++  E E             ++L D   C                           + +M
Subjt:  PTP--RRENLEEESETAASVWMNSMPSVRRVSRVIYGLTNQILRESEVTARNDAVLRYSFRQLHDPKFCFFVKQYLSELHVPAAPCEVIAQKFTSLITQM

Query:  AAKNRDTNFHIFIEIDFIRVAKMEPIPGVLELTAHGRRNIGSDGALLISCGHVYHLSCIVTSLNINGNYTCPLCRAPLPL
          K R+                                       +   CGHVYH SCI   LN++   +CPLC+ PLPL
Subjt:  AAKNRDTNFHIFIEIDFIRVAKMEPIPGVLELTAHGRRNIGSDGALLISCGHVYHLSCIVTSLNINGNYTCPLCRAPLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTAGCTACTTCCACACCGATTGAGTATCGTCTTTACCATTACAGTAACGGCATCGCGGCTTCCGGCGAGCAAGAGCAACCGTATCAAATTCTGCAAGTTCGATT
GCGATATCTCCGCCGTCTGATCTATGTTTCTCCGTCCGGTAGAGTTTCGCCACAAATCCTCGACGAAACCACGTCGACTCCACCGAAGAATGCTCTGTTCAATCTCTCTC
TGCGCCGTCTCCAAGATCCGTTGTCCTACGTTACGCAGTTGCTATCCTCATTCAACATCCGCGCCGCCGCCTGCGAAGTCATTGCTCCGGATATCGCGTCGTACATCATC
CAAATCGCCGGCGGAAAAAGAGAGACGAACTTCCATATCGTCGCCGAGGTGGACTACATCCGACTCGCCTGGATGGAACCAACGCCTAGACGAGAGAATTTGGAAGAAGA
ATCGGAGACTGCAGCATCTGTTTGGATGAACTCAATGCCAAGTGTAAGAAGAGTGAGTCGTGTGATTTATGGACTTACAAACCAAATCCTTCGTGAGAGTGAAGTGACTG
CACGTAATGATGCTGTGCTCCGTTATTCTTTTCGCCAACTCCACGATCCCAAGTTCTGCTTCTTTGTCAAGCAGTACCTCTCCGAGCTCCACGTCCCTGCTGCCCCTTGC
GAAGTCATTGCTCAGAAATTCACGTCCTTAATCACCCAAATGGCAGCCAAAAATAGAGACACAAACTTCCACATCTTCATCGAGATCGATTTCATCCGAGTTGCCAAGAT
GGAGCCCATTCCCGGAGTACTGGAGTTGACGGCACATGGCAGGAGGAATATTGGCAGCGACGGTGCATTGCTGATCTCCTGCGGTCATGTCTATCATTTATCATGCATCG
TCACTTCCCTTAACATTAACGGCAACTATACATGCCCCTTGTGCAGAGCCCCATTGCCATTATTAAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTAGCTACTTCCACACCGATTGAGTATCGTCTTTACCATTACAGTAACGGCATCGCGGCTTCCGGCGAGCAAGAGCAACCGTATCAAATTCTGCAAGTTCGATT
GCGATATCTCCGCCGTCTGATCTATGTTTCTCCGTCCGGTAGAGTTTCGCCACAAATCCTCGACGAAACCACGTCGACTCCACCGAAGAATGCTCTGTTCAATCTCTCTC
TGCGCCGTCTCCAAGATCCGTTGTCCTACGTTACGCAGTTGCTATCCTCATTCAACATCCGCGCCGCCGCCTGCGAAGTCATTGCTCCGGATATCGCGTCGTACATCATC
CAAATCGCCGGCGGAAAAAGAGAGACGAACTTCCATATCGTCGCCGAGGTGGACTACATCCGACTCGCCTGGATGGAACCAACGCCTAGACGAGAGAATTTGGAAGAAGA
ATCGGAGACTGCAGCATCTGTTTGGATGAACTCAATGCCAAGTGTAAGAAGAGTGAGTCGTGTGATTTATGGACTTACAAACCAAATCCTTCGTGAGAGTGAAGTGACTG
CACGTAATGATGCTGTGCTCCGTTATTCTTTTCGCCAACTCCACGATCCCAAGTTCTGCTTCTTTGTCAAGCAGTACCTCTCCGAGCTCCACGTCCCTGCTGCCCCTTGC
GAAGTCATTGCTCAGAAATTCACGTCCTTAATCACCCAAATGGCAGCCAAAAATAGAGACACAAACTTCCACATCTTCATCGAGATCGATTTCATCCGAGTTGCCAAGAT
GGAGCCCATTCCCGGAGTACTGGAGTTGACGGCACATGGCAGGAGGAATATTGGCAGCGACGGTGCATTGCTGATCTCCTGCGGTCATGTCTATCATTTATCATGCATCG
TCACTTCCCTTAACATTAACGGCAACTATACATGCCCCTTGTGCAGAGCCCCATTGCCATTATTAAAGGAATGA
Protein sequenceShow/hide protein sequence
MSLATSTPIEYRLYHYSNGIAASGEQEQPYQILQVRLRYLRRLIYVSPSGRVSPQILDETTSTPPKNALFNLSLRRLQDPLSYVTQLLSSFNIRAAACEVIAPDIASYII
QIAGGKRETNFHIVAEVDYIRLAWMEPTPRRENLEEESETAASVWMNSMPSVRRVSRVIYGLTNQILRESEVTARNDAVLRYSFRQLHDPKFCFFVKQYLSELHVPAAPC
EVIAQKFTSLITQMAAKNRDTNFHIFIEIDFIRVAKMEPIPGVLELTAHGRRNIGSDGALLISCGHVYHLSCIVTSLNINGNYTCPLCRAPLPLLKE